Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1892 ATGGCTGGTTTTGGTTCACCTTGTGGAGCTTGCAAATTTTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGTAATGAACAAGGTGCTGCCCATTTTGCAGCTATTCATAAGGTGTTTGGTGCAAGCAATGTCTCAAAGCTCCTTCAACATCTCCCTGTGAGTGATCGTTGCGAAGCCGCGGTCACAATCTCATATGAAGCTCAAGCTAGGGTTCAAGACCCAATTTATGGATGTGTTGCACATATTTTTGCACTCCAACAGCAGGTGGTTAATTTACAAGCACAACTAGCTTATCTAAGGGAACAAGCAGGCCAAAGTTGTTTCAATCTCTCTGGTGCTGAAAACCCTAATGAGAGGTACTTTGGAAAACCTACAAGTTCAATCCCCATGGATCTTCAAAATTGGTTTCAGATGGAAAATCCCAACATGGGTTCACAATTTCATCCTAACTTGTATAATACTCCCTCAACAACACAACACTATGGGAATAATTCAGATCCAAACCCTATTGGGAATTATGAAAGTTCAGGAACTACCCTTGATGAAAGCACCTCATTTTCTTGCTTTGAGGAGAGTTGTAACTCCATGTCCTATGAGATTCACAGGCAGTGGGGTTTTCATGAAGTGGATCATAACCTTCAGTAA 660 0.4121 MAGFGSPCGACKFLRRKCVRGCVFAPYFCNEQGAAHFAAIHKVFGASNVSKLLQHLPVSDRCEAAVTISYEAQARVQDPIYGCVAHIFALQQQVVNLQAQLAYLREQAGQSCFNLSGAENPNERYFGKPTSSIPMDLQNWFQMENPNMGSQFHPNLYNTPSTTQHYGNNSDPNPIGNYESSGTTLDESTSFSCFEESCNSMSYEIHRQWGFHEVDHNLQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1892 219 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lal1g1892 219 Coils Coil 87 107 - -
Lal1g1892 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 200 - -
Lal1g1892 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 200 - -
Lal1g1892 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Lal1g1892 219 MobiDBLite consensus disorder prediction 151 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1892 Lal-Chr1 21191947 21193690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1892 7 201 AS2 family AT3G58190 55.838 1.26e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal1g1892 LOB 2.5e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1892 1 21191947 21193690 Lal1g1892 1 21191947 21193690 ECH