Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1887 ATGGCTAGGGAGCATATTCATGTGCTAAATGCACTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCAATTATCATTGCAGGAATGGGTTTCTTCACTGATGCATATGACCTGTTCTGCATATCTCTTGTTACAAAATTGCTGGGCCGAATTTACTACCACGTTGATGGCGCAGGGAAGCCTGGTACATTGCCTCCAAATGTATCAGCTGCTGTAAATGGTGTAGCCTTCTGTGGAACACTTTCTGGTCAGCTTTTCTTCGGTTGGCTCGGTGATAAGATGGGCCGAAAAAAAGTGTATGGCATGACCCTGATGATTATGGTTATTTGCTCAATTGGTTCAGGCCTTTCTTTTGGACATAGTCCAAATTCTGTGTTGGCAACTCTTTGCTTTTTCAGGTTCTGGCTTGGATTTGGTATTGGTGGAGATTATCCTCTTTCTGCTACCATAATGTCTGAGTATTCTAATAAGAAGACTCGCGGCTCGTTCATTGCTGCGGTCTTTGCTATGCAAGGTTTTGGAATTTTGGGAGGTGGGATATTCGCAATTATAATTTCGGCTGCGTTTAAGGCCAGGTTTGATGCTCCAGCTTATGAGGTTGATCCAGTTGGTTCAACTGTTCCACAAGCAGATTATATTTGGAGGATAATTGTTATGGTAGGAGCACTTCCAGCAGCATTGACTTACTATTGGCGAATGAAGATGCCTGAAACTGCACGTTACACAGCGCTTGTTGCAAAGAATGCACAACAAGCCGCAGCAGATATGTCTAAGGTTCTACAAGTCGAGATTCAATCTGAAACAAATAAAGAAGAGGCGCAGGGAAAACCATCATTTGGCTTGTTCTCCAAGGAATTCCTTCGACGCCATGGACTACATTTACTTGGCACTGCAAGCACATGGTTCTTGCTTGATATTGCATTCTACAGTCAGAATCTATTCCAAAAAGATATTTTCAGCGCAATAGGTTGGATCCCTCCTGCCAAAACAATGAATGCTCTTGATGAAGTTTATCGAATTGCGAGGGCGCAAACGCTTATCGCTCTTTGCAGTACAGTTCCAGGATACTGGTTCACAGTTGCCTTAATTGACAGGATTGGAAGGTTTGCTATACAATTGATGGGATTCTTCTTCATGACAGTCTTCATGTTCGCTCTCGCCATTCCTTATGATCACTGGACTCATAAGGATAACCGAATCGGCTTTGTGGTCATTTATTCACTAACCTTCTTCTTCGCGAATTTTGGGCCTAATGCTACAACATTTGTTGTCCCTGCAGAGATTTTCCCTGCCAGATTCCGGTCCACTTGCCACGGAATATCATCAGCATCCGGTAAGCTTGGGGCTATAGTTGGTGCATTCGGATTCTTGTACTTGGCACAGAACAAGGACAAGAGTAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTGATTGTGTTAGGTGTAGTTAATATTTTAGGCTTCTGCTTTACTTTCTTGGTGCCTGAGCCAAATGGAAAATCTTTGGAAGAGATGTCTGGTGAGAATGAAGAGGAAGAACCAACCAAGGAAGGTTCATACAACAACAACAACAACAACAACAACAGAACTGTTCCATATGTTTAG 1623 0.4295 MAREHIHVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAGKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMIMVICSIGSGLSFGHSPNSVLATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGSFIAAVFAMQGFGILGGGIFAIIISAAFKARFDAPAYEVDPVGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAQQAAADMSKVLQVEIQSETNKEEAQGKPSFGLFSKEFLRRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALDEVYRIARAQTLIALCSTVPGYWFTVALIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKTDAGYPAGIGVKNSLIVLGVVNILGFCFTFLVPEPNGKSLEEMSGENEEEEPTKEGSYNNNNNNNNRTVPYV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1887 540 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Lal1g1887 540 SUPERFAMILY MFS general substrate transporter 11 512 IPR036259 -
Lal1g1887 540 MobiDBLite consensus disorder prediction 524 540 - -
Lal1g1887 540 CDD MFS_PhT 25 503 - -
Lal1g1887 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Lal1g1887 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Lal1g1887 540 MobiDBLite consensus disorder prediction 507 540 - -
Lal1g1887 540 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 523 - -
Lal1g1887 540 Pfam Sugar (and other) transporter 26 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal1g1887 540 TIGRFAM 2A0109: phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1887 Lal-Chr1 21143078 21144700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1887 1 519 Inorganic Solute Cotransporters AT3G54700 84.008 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1887 K08176 - gmx:100819445 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1887 1 21143078 21144700 Lal1g1887 1 21143078 21144700 ECH
Lal1g1887 1 21143078 21144700 Lal20g0024 20 186343 187947 LSH
Lal13g1020 13 7527987 7529546 Lal1g1887 1 21143078 21144700 PCT
Lal24g0780 24 6064310 6065926 Lal1g1887 1 21143078 21144700 PCT