Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1882 ATGGATTCTGCAAGGAGTTGGCTTCAAAAGTTTCAGCCACGTGATAAAATGAGAGCTACTTCAAGGAAGAATGATGATAGTAATGAAGGAAATGAAGATTCGAGTGTGCCACTCGATGAAGCTGCTCTTTCCAATATCACAAAGCAGAAAGTTGCGGCGGCGAAACAGTATATTGAGAACCATTACAAGGAGCAAATGAAGAGCCTTCAGGAGAGGAAGGAACGCCGAACCATATTGGAAAAGAAGTTGGCTGATGCAGATGTTTCTGAGGAAGATCAAAACAATTTACTTAAGTTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAAAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTGACTATGATTGGCAAAGGTGCATTTGGGGAGGTGAGAGTTTGTAGGGAAAAGACTACAGATCACGTATATGCAATGAAAAAGCTAAAGAAATCTGAGATGCTCCGTAGAGGCCAGGTAGAACATGTTCGAGCTGAGAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTCTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATTATGGAATACCTACCGGGCGGGGATATGATGACTCTACTTATGAGAAAAGATACATTGGATGAAGATGAAGCCCGGTTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATACACAGGGATATTAAGCCCGACAACTTATTACTTGATAGATATGGACACTTGAGATTGTCAGATTTTGGACTATGTAAACCATTAGACTGTAGCACACTTGAAGAGTCGGATTTTTCTCCAAGTCAGAATGCAAATGCATCTGCACATAATGATGAGCATGGAACTCCAAAACGCACACAACAAGAACAATTAGATAACTGGCAGAAGAATAGGAGGACACTCGCTTATTCTACTGTCGGTACACCAGATTATATTGCTCCAGAAGTTTTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCGCTTGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCGACATGTAGGAAGATAGTAAATTGGAAATCTCACTTGAAATTTCCCGAAGAAGCAAGACTGTCTCCAGAAGCTAAAGATCTCATTAGTAAGCTTTTGTGTAATGTTAACCAGAGGTTGGGGTCAAATGGCGCAGCTGAAATAAAGGCTCATCAATTCTTTGAAGGCATTGAATGGGATAAGTTGTATCAAATGGAAGCTGCATTTCTTCCCGAGGTCAATGATGAGTTAGATACACAAAATTTTGAAAAGTTTGAAGAGTCCGACAACCATACTCAGTCATCGTCAAGAGTTGGTCCATGGAGGAAGGTAAGCTTAGATGTTTACTTTCAATTGGAAATTGTTACCGATAGGATGAGCCGAGGCACAACTGTAAAGTTGTTTGCCTTGTTCCCTTTTTCTCATTCTTATTTTGTGTTCGTTATCGAGTTGATGCAGATGCTTTCATCCAAGGACTTGAATTTTGTGGGATACACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCAGGGATGGCTGAATTGAAGAAAACCTCCAAATCAAAGGCTAGGCCATCAGTCAAGTCACTCTTTGGTGATAATGAGTCTGAGACATCGGAAGCGTCCGAGGCTTCAGAAGCCTCTGCAAGCAATCAATCTGCTCATGGAAGTTAA 1752 0.3995 MDSARSWLQKFQPRDKMRATSRKNDDSNEGNEDSSVPLDEAALSNITKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLDEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLEESDFSPSQNANASAHNDEHGTPKRTQQEQLDNWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGAAEIKAHQFFEGIEWDKLYQMEAAFLPEVNDELDTQNFEKFEESDNHTQSSSRVGPWRKVSLDVYFQLEIVTDRMSRGTTVKLFALFPFSHSYFVFVIELMQMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKTSKSKARPSVKSLFGDNESETSEASEASEASASNQSAHGS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1882 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Lal1g1882 583 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1882 583 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 468 - -
Lal1g1882 583 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 511 567 - -
Lal1g1882 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 468 - -
Lal1g1882 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 511 567 - -
Lal1g1882 583 MobiDBLite consensus disorder prediction 543 583 - -
Lal1g1882 583 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1882 583 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1882 583 MobiDBLite consensus disorder prediction 276 290 - -
Lal1g1882 583 MobiDBLite consensus disorder prediction 276 306 - -
Lal1g1882 583 MobiDBLite consensus disorder prediction 1 38 - -
Lal1g1882 583 MobiDBLite consensus disorder prediction 557 583 - -
Lal1g1882 583 MobiDBLite consensus disorder prediction 9 30 - -
Lal1g1882 583 Gene3D Phosphorylase Kinase; domain 1 91 203 - -
Lal1g1882 583 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 534 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g1882 583 Gene3D Transferase(Phosphotransferase) domain 1 312 438 - -
Lal1g1882 583 Gene3D Transferase(Phosphotransferase) domain 1 204 276 - -
Lal1g1882 583 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Lal1g1882 583 CDD STKc_NDR_like 118 525 - -
Lal1g1882 583 SUPERFAMILY Protein kinase-like (PK-like) 93 465 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1882 Lal-Chr1 21114044 21119653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1882 1 558 AGC Kinase Gene Family AT2G20470 73.535 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal1g1882 Pkinase 6.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1882 K08790 - gmx:100805940 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1882 1 21114044 21119653 Lal1g1882 1 21114044 21119653 ECH
Lal1g1882 1 21114044 21119653 Lal2g1163 2 8489569 8503281 PCT
Lal12g0848 12 6942433 6953874 Lal1g1882 1 21114044 21119653 PCT
Lal13g1042 13 7688850 7700635 Lal1g1882 1 21114044 21119653 PCT