Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1869 ATGCCCACTTTCCTTTTCTTCCTCCTTCCTCTTCTTACCTTTCTTTTCACTTCTTCAGTGGTAAGGCTGCGTACAATGACCCTCTCCGAATCCAATATTCCTTTTAAGGTGCTCTCTACAGATATATACAATGCTGTTATGTATGACATAGTTGGTTCTTTGTATGCAGTGAAGTCGGTTTCTCTAAGTGTATCATTCACTTCATCAGAACGAGGTAAGGCATGGTTAGTTAAACCTTCTTCTAGACAATCTCCCGCATCAGCACCATCTCCATCTTATCAAGGTCCTAGCGTGACTCCAAGACCAAGACATTATCTTCACCGAGGTCACCATCATAGCATGACACCTTATATAGTGGCTCCACCCCCTTCGGAAGACCTAGCTTGTGTCTGTATGGAACCACTCATATCAACTCCCTATGGTTCTCCTTGTGGTTGCGTATTTCCCATGAAAGTTAGACTTTCACTGGATATAGCTCTTTATGCTGTTTTTCCGGTAATGGATGAGTTAGAGATTGAAGTGGCATTAGGCACATATTTAGAGCAAAGTCAGGTCAAGATAATGGGAGCCAATGCTGATGGTCAAAACCAGGGAAGAACTATTGTTGATATTTACTTGGTTCCACTAGGAGATAAATTTGATGATACAACTGCAGCTTTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGACCCTTTTTGGTGATTATAACGTCATGTACCTTACTTATGAAGGATTTCCACCATCACCATCATATGGAAATTATGACGGGACTGGTCCCAGTGAAAGTCCTAAGAGTCTACCACTCAGTGCTAACTTTGACAACAAGAACCAGAAAATGAATCTTAGAACCATAGTCATCATTGCTTTAACTTCTTTTGTACTCTTGCTGGTTTTGGTTGGAGCATGTTTTGGCATTTTGAAATGGAGGAAGGTCACAAAACCATCAAGTGCCGTTGGCCCTACGTTCACATCATCTATAAACAAGAGATCTGGCCTGGGGTCAATGTTGTCAAGCAGTATCACAAGCTCAACATCAATGTCCCTTATGTCAACAATGCCTAATTCCATCCAATCTGTTAAAACATTTTCACTTTCCGAGCTTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTATTAGGAGAGGGAGGATTTGGACGTGTTTACAGTGGGACACTGGAAGATGGGACTGAAGTTGCAGTTAAGATGCTAACAAGGGATAATAATCAGAATGGAGATCGTGAATTCGTCGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATCTGCATGGTGTTGACAAGAAAGACGGACCACTAGATTGGGAAGCGCGGATGAAAATTGCCCTTGGAGCTGCAAGAGGGTTGGCGTATCTTCATGAGGATTCTAATCCCCGCGTGATTCACCGTGACTTTAAAGCTAGCAATGTGTTATTAGAAGATGACTTTATTCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACAGAAGGAAGTCATCATATTTCTACACGGGTGATGGGAACTTTTGGGTACGTTGCCCCAGAGTATGCGATGACAGGCCATTTACTTGTTAAAAGTGATGTATATAGCTTTGGTGTTGTGCTGCTTGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAAGGACGGGAGAATCTTGTCACTTGGGCACGACCACTTTTGACGACTCAAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAACATACAACTTCGACGACACAGCGAAGTTCGCTTCCATCGCTTCAATGTGTGTTCACCCGGAGGTCACTCAGAGACCCTTTATGGGCGAAGTTGTGCAAGCTATTAAGTTGATATACAACGACGCAGATCATGAAACATGTGGAGATTGTTTTAGCCTGAAGGACTCATCTACCCACGAGTCTGATTTTCGATGCGGCCATTCTGATAGCAGTTGGTGGAATGGTGGAGGGTTAACTCCTAGACTAACTTGTGGCCAAACATCATCTTTCATCACAATGGAGTATAGTTCTGGCCCAATTGAAATGGAAAACAGACAATTTTCAACTTCAAGTTTGGTTGAAGATATATCTTTACCAATTAGGCATGGGAATATGTCAGGTCCCTTAAGAACAAACAGAAGCAATTTATCCTTATATAGATTTACAGGAAGCAAGAGTGAGCATGGAAGAGTGACCAAATTAGTTTAG 2319 0.4256 MPTFLFFLLPLLTFLFTSSVVRLRTMTLSESNIPFKVLSTDIYNAVMYDIVGSLYAVKSVSLSVSFTSSERGKAWLVKPSSRQSPASAPSPSYQGPSVTPRPRHYLHRGHHHSMTPYIVAPPPSEDLACVCMEPLISTPYGSPCGCVFPMKVRLSLDIALYAVFPVMDELEIEVALGTYLEQSQVKIMGANADGQNQGRTIVDIYLVPLGDKFDDTTAALTSERFWHKKVPLNRTLFGDYNVMYLTYEGFPPSPSYGNYDGTGPSESPKSLPLSANFDNKNQKMNLRTIVIIALTSFVLLLVLVGACFGILKWRKVTKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSMSLMSTMPNSIQSVKTFSLSELEKATDKFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFVAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKDGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFIPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGRENLVTWARPLLTTQEGLEQLVDPSLAGTYNFDDTAKFASIASMCVHPEVTQRPFMGEVVQAIKLIYNDADHETCGDCFSLKDSSTHESDFRCGHSDSSWWNGGGLTPRLTCGQTSSFITMEYSSGPIEMENRQFSTSSLVEDISLPIRHGNMSGPLRTNRSNLSLYRFTGSKSEHGRVTKLV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1869 772 ProSiteProfiles Protein kinase domain profile. 379 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1869 772 Gene3D Transferase(Phosphotransferase) domain 1 456 672 - -
Lal1g1869 772 MobiDBLite consensus disorder prediction 80 94 - -
Lal1g1869 772 Gene3D Phosphorylase Kinase; domain 1 350 455 - -
Lal1g1869 772 CDD STKc_IRAK 385 655 - -
Lal1g1869 772 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Lal1g1869 772 PANTHER OS01G0750732 PROTEIN 47 768 - -
Lal1g1869 772 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 47 768 - -
Lal1g1869 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Lal1g1869 772 MobiDBLite consensus disorder prediction 77 105 - -
Lal1g1869 772 SUPERFAMILY Protein kinase-like (PK-like) 360 653 IPR011009 -
Lal1g1869 772 Pfam Protein tyrosine and serine/threonine kinase 381 650 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1869 Lal-Chr1 20975844 20981618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1869 128 772 Receptor kinase-like Gene Family AT5G56890 52.077 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal1g1869 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1869 - - gmx:100792309 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1869 1 20975844 20981618 Lal1g1869 1 20975844 20981618 ECH
Lal11g1103 11 14714179 14719895 Lal1g1869 1 20975844 20981618 LSH
Lal1g1869 1 20975844 20981618 Lal13g1063 13 7887133 7900693 PCT
Lal13g1063 13 7887133 7900693 Lal1g1869 1 20975844 20981618 PCT