Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1867 ATGAATGAGATTCAGAGAAGAAAAGTTCAGAATGTTGAAAAACCTTTCCCAGGTTGTTTGGGAAGAATGGTTAATCTCTTTGATTTCTCTCCTTCTGTCACAGGAAATAAGCTACTCACTCATCAACCACATCGTGATGCTTCTTCACTTTCACGAAGTCGGTCAGATGTTGTGAGGGTCATTGGTTCCTCGTTTGGTTATCAGCTAGAGGATAAGATGATTGTTTCTGACTCGACGCGAGCATCACCGAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAATTTGCTTCCAAGCACAATGCACCAAATGTAGTTGCTAAATTAATGGGGCTTGATGCTCTCCCATGTGGAGAGCCTAATTTAGCGGTGGAGAGAAGTGATATACGAGATTATTCTCAACATATGCGTAGTCATTCGGGGACACCATTCAAACATAGACAGCTAGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCTCAACACGGAACAGATTGCTTACAAAGATATTTACGATATATGGCTTCGATCTCATAGAACAAGCAATGTAAGAGACAAGACACCAGAGAGAGAAAAGTGGACTGAAGATGTTAATGCAAAAAAAATGGCTCTCATTTACCAGAAATTCATGGAAGCAAAATGTCTGTCTACAGATGAGAGACTACGTCAGTCTAAGGAGTTTGACGAGGCCTTGGAAGTTTTAAGCTCCAATAATGATCTGTTAATCCAGTTATTGGATTCTCCAAATCTATATGAACTTCAGTCTACTCCACTAGTTGAAACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAAATCCGGTGGAAAGGGGAAGCAGAATGACAAGCAGAATAAGAAACCCGCAAATGTTTGTCAAGCAGCTGCATGGGAGAAAAACAGCCCTGGTTACTCTCCAGCCTGTCAAAAAGTTGCCGAGCTTCCAGTTCAACCTACTCGCATAGTGGTATTGAAGCCTAGCTCTGGGAAGACACAAGAGATTAAGGCTGTAGCTTCTCCAACAATGTCATCACCTCGGAATATGCAAACTGGAAATTTATATCAGGGGCCTGAAGACGGTGATGCACTAGAACCAAGAGAAGCCGCAAAAGAAATTACACACCAAATGCATGAAAGCCCGAGGAGCCATCAAAGAGATGAAGCTTTTTATTCTTCAGTATTTTCCAATGGCTATACTGGTGATGAGAGTTCATTCGACAGATCAGATAATGAGTATACTGCTGAGAATTTAATTGATGTGGAAGTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGTCCTTATTCTTCATCATCATTCAGTCGTGCATCATGTTCTCCCGAGCCATCAGTATGCAGGGAGGCCAAAAAACGCCTTTCTGAAAGATGGGCCATAATGGCATCAAATAAGGGTCCTCAAGATCAAAGGCATTTGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGTAACATCTGAGGTTGAGGGTATTAGTAAGACACAAGAGCCAAGTGAATCGGTTTCTTGCAGTCGTAATAATTTCAGTGAAGAAATATGCATGGATGGTTCTCCTAAAAATCTTCCCAGGTCAAAGTCTGTCCCTGTATCTTCTACTGTATATGAGACCAGTATCGACAGTGAAGTTTGTGATCATGATGCCAGCAAAACACATTATTCCAAGGAACTGACGAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAGCTTCTTATTCTCAAGGAATAAGAAAGCAACCAAGGAAAAATCTCCTTTGTCTCAATCTAAAGATGAATCACAATCTAATGTATCTGAAACATCAGTATTTCAAGTAAATTCACTTGGAGCCCTTAGGGATGCTATGTCTCAAAGCTTCAAAAGCGGTCCCCTTGGAGAGTTCTCTCTTCCAGACCTACATGAATTGTCGGGGAAAACCTTATTAGATTCGGTCTCTAAAGGAAAAGGCACAATATCTCTTGAGTGTGAGTTGACTGTGTCAAAGACTACAATGCCAGGGATTTCAACAGAAAACCAGGATCAGCCGAGTCCAATATCAGTTTTAGAACCTCCGTTTGAAGACGATAATGCAACTCGTGAGTCCTTGGACTGTATGAAGGGTGGACATCTGGGATCACAAGTGTCTCGGAAGTCTAATTTAATCGACAAGTCACCACCAATAGAATCAATAGCTAGAACCCTATCATGGGATGATTCTTGTGCCGAGGTATCAAGTCCATACTCATCAAAGCCCTCCTCGGCTTCCCTAGAGACCAAGGTAGAGGAACAAGACCTGCTTGTCTTAGCCGAGAAACTACTCTCAGCAGCTGGACTTGATGATCAAGTGAAGTCTGATTCATTTAACTCAAAATGGCATTCCCTTGAAAGTGCATTGGACCCATCATTTAGGGACACATATGCCGATCTTAACGAGAAGGAGTCTCAGTCTCAGCCTCTTCATGAAGCCAAGAGAAGGCAAATAAGATCAAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCACTAATGGAAATTAGTGGTTATGGATCAGAAAACTTCTTACTTAGCAGGGTGGTGGGTGAAGCTCCTTTATTGGTGAACCAAATTGTGGCCCAAATGAAGGACTTAAATGTTGGATTAAGGTCTGTTTGGGGGGATTGTGGGGACAGTAACAACCTGGTATTGGAAAATATTGTCAGAAAAGAGGTTGTTGGGAAAGGTTGGGTTGAACTTATGGGTTTGGAAGTTGATATATTTGTGAAGGAAATAGAAGGGAAGTTGCTAGAAGAACTTGTGGATGATGCTGTGGTTGATTTTACATGCAGGGCTTGA 2922 0.4131 MNEIQRRKVQNVEKPFPGCLGRMVNLFDFSPSVTGNKLLTHQPHRDASSLSRSRSDVVRVIGSSFGYQLEDKMIVSDSTRASPNKKINGTPIKMLIDQEMSKEFASKHNAPNVVAKLMGLDALPCGEPNLAVERSDIRDYSQHMRSHSGTPFKHRQLEDRFMDKEMLHEVHLNTEQIAYKDIYDIWLRSHRTSNVRDKTPEREKWTEDVNAKKMALIYQKFMEAKCLSTDERLRQSKEFDEALEVLSSNNDLLIQLLDSPNLYELQSTPLVETKRITVLKPSKMVDNEKSGGKGKQNDKQNKKPANVCQAAAWEKNSPGYSPACQKVAELPVQPTRIVVLKPSSGKTQEIKAVASPTMSSPRNMQTGNLYQGPEDGDALEPREAAKEITHQMHESPRSHQRDEAFYSSVFSNGYTGDESSFDRSDNEYTAENLIDVEVMSPSPRHSWDYINRCGSPYSSSSFSRASCSPEPSVCREAKKRLSERWAIMASNKGPQDQRHLRRSSTLGEMLALSDIKKSVTSEVEGISKTQEPSESVSCSRNNFSEEICMDGSPKNLPRSKSVPVSSTVYETSIDSEVCDHDASKTHYSKELTKSKSMKSSFKGKVTSFLFSRNKKATKEKSPLSQSKDESQSNVSETSVFQVNSLGALRDAMSQSFKSGPLGEFSLPDLHELSGKTLLDSVSKGKGTISLECELTVSKTTMPGISTENQDQPSPISVLEPPFEDDNATRESLDCMKGGHLGSQVSRKSNLIDKSPPIESIARTLSWDDSCAEVSSPYSSKPSSASLETKVEEQDLLVLAEKLLSAAGLDDQVKSDSFNSKWHSLESALDPSFRDTYADLNEKESQSQPLHEAKRRQIRSNQKLVFDCVNVALMEISGYGSENFLLSRVVGEAPLLVNQIVAQMKDLNVGLRSVWGDCGDSNNLVLENIVRKEVVGKGWVELMGLEVDIFVKEIEGKLLEELVDDAVVDFTCRA 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1867 973 MobiDBLite consensus disorder prediction 283 300 - -
Lal1g1867 973 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 971 - -
Lal1g1867 973 Pfam Domain of unknown function (DUF4378) 801 964 IPR025486 -
Lal1g1867 973 MobiDBLite consensus disorder prediction 283 304 - -
Lal1g1867 973 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 971 - -
Lal1g1867 973 MobiDBLite consensus disorder prediction 702 729 - -
Lal1g1867 973 Pfam Protein of unknown function (DUF3741) 219 261 IPR022212 -
Lal1g1867 973 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
Lal1g1867 973 MobiDBLite consensus disorder prediction 617 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1867 Lal-Chr1 20940379 20945752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1867 1 970 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.227 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1867 - - var:108322999 1366.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1867 1 20940379 20945752 Lal1g1867 1 20940379 20945752 ECH
Lal11g1106 11 14781444 14788206 Lal1g1867 1 20940379 20945752 LSH
Lal1g1867 1 20940379 20945752 Lal20g0044 20 314397 318956 LSH
Lal1g1867 1 20940379 20945752 Lal12g0878 12 7219001 7223231 PCT
Lal12g0878 12 7219001 7223231 Lal1g1867 1 20940379 20945752 PCT