Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1861 ATGGAAGCTCATCAATTAACAGCACTTATTGTTGATGATGACATGATGATTCGAATGATTCATAGAAAAATGTTGAGCAATATTGGAGTTAGAAATCAAGCTGTGCAGAATGGAAAAGAAGCAATAGATCTTCATCACTCTGGAAAAAGCTTTGATCTTATTCTCATGGATAAGGATATGCCTGTTATGAATGGTGTTGAGGCAACAAAGAAGCTAAGATCAATGGGGATTCATAGCATGATTGCTGGTGTATCAAGTTCAGTGGAAAAACATATACCAGAGTTTATTGAAGCAGGACTAGATACTTATCTAGAGAAGCCATTAAACACTGATAAGCTCAATTCAATCATTCATCAGATTATACATTAG 369 0.3496 MEAHQLTALIVDDDMMIRMIHRKMLSNIGVRNQAVQNGKEAIDLHHSGKSFDLILMDKDMPVMNGVEATKKLRSMGIHSMIAGVSSSVEKHIPEFIEAGLDTYLEKPLNTDKLNSIIHQIIH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1861 122 ProSiteProfiles Response regulatory domain profile. 7 121 IPR001789 GO:0000160
Lal1g1861 122 CDD REC_hyHK_CKI1_RcsC-like 9 113 - -
Lal1g1861 122 Gene3D - 2 122 - -
Lal1g1861 122 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 120 - -
Lal1g1861 122 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 120 - -
Lal1g1861 122 SUPERFAMILY CheY-like 5 121 IPR011006 -
Lal1g1861 122 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
Lal1g1861 122 SMART REC_2 6 117 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1861 Lal-Chr1 20871103 20871995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1861 6 121 Response Regulator Gene Family AT3G04280 47.059 1.06e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal1g1861 Response_reg 2.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1861 - - rcu:8262779 155.221