Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1850 ATGACTCAGTTCTTGAAGCCGGAGAATGCTCTCAAAAGAGCAGAAGAATTGATAAACGTTGGGCAGAAGCAAGATGCTTTGCAGACACTTCATGACCTTATTACTTCGAAAAGGTACCGAGCATGGCAGAAGACGCTCGAAAAGATCATGCTCAAGTACATAGACCTATGTGTAGAAATGCGCAAAGGTCGGTATGCTAAGGATGGTCTCATTCAGTATCGTATTATATGCCAGCAAGTTAATGTTGGATCGTTGGAGGAGGTGATCAAGCATTTCATTCACCTCTCCACTGAGAAAGCTGAACATGCCCGGAGCCAGGCAGAGGAGTTGGAAGCAGCTCTCGATGTTGATGATTTAGAGGCTGATAAAAAGCCTGAGGATTTGATGCTCAGTTATGTCAGTGGAGAAAAAGGAAAGGAGAGATCCGACCGGGAGCTTGTTACCCCGTGGTTTAAGTTTCTTTGGGAAACGTACCGGACCGTGCTTGAAATCTTACGAAACAACTCAAAACTGGAAGCCCTATATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACAACTGAGTTCCGCAGACTCTGTGAAATCATAAGAAACCACTTGGCAAATCTGAATAAGTACCGTGACCAACGAGACCGGCCTGATCTTTCTGCTCCTGAAAGCTTGCAACTGTATCTCGATACAAGATTTGAGCAGCTGAAAATTGCAACTGAACTTGGACTCTGGCAGGAAGCTTTTCGATCAGTTGAAGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCGAAGGCATCCTTGTTGGTTGTTTACTATGCTAAGCTGACCGAAATATTTTGGATATCTTCAAGTCATCTATATCATGCATATGCGTGGTTCAGGCTCTTTGTATTACAAAAAAGCTTCAATAAGAATTTAAGTCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTTCCTCCTCATGATCACAGTCATGGTGCATCTCATCTTGAACTGGAGCATGAAAAGGAGAGAAATTTGAGGATTGCTAACCTCATTGGCTTTAACCTTGAAACTAAACCTGAAAGCAGAGAAGTGCTTTCCAGGTCATCACTTCTCGCCGAACTGGTATCCAAGGGCGTGATGTCATATGTAACTCAAGAAGTGAAGGACATTTACCATCTTCTGGAACATGAATTTCTTCCTTCGGATCTTGCATTAAAAGTGCAGCCCTTGTTAACCAAAATCTCAAAGTTAGGGGGTAAGCTTTCTACTGCTTCATCTGTCCCAGAGGTGCAATTGTCTCAGTATGTTCAAGCACTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTCTACCAGACAATGAAGATCGAGACCTTATCCGGGATGATCCCGTTCTTCGATTTTTCAGTAGTGGAAAAGATTTCTGTTGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTCGACCACATGAAAAATGTCGTAATTTTCTGCAAAGTGAGTCTTGAGTCTGATGGTTTAAGGGATCACCTGGCCAATTTTGCTGAACAATTGAACATGGCAAGACAAATGATTTATCCTCCAGAGAGGAAGCCATCAAAACTTGGAGCTCTACTTCCCTCTTTGACAGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAGCGTCAGCTTCTTGAAATGGAACGTGAGGAAGAGTCGAAGAAGTTAAGACTGCAGAAAATAACCGAAGAAGCTGAGCAAAGAAGACTTGCCGCTGAGTATGAGCAGAGGAAGAATCAAAGGATTCTCAGGGAAATTGAAGAAAGACAAATGGAGGAAACTCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATTGAGGGGGATAAAATGTCCAAGCAGACTCTGATGGAGTTGGCTTTGACTGAACAAGTCCGAGAAAGACAGGAAATGGAGAAGAAACTGCAAAAATTTGCTAAGACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAGGCTGCACCTATAATTGAAGCTGCATATCAACAACGCCTAGTTGAAGAGAGGATTCTTCATGAGCATGAGCAACAAAAAGAGGTTGAACTGAGCCAACAGCGGCATGAGGGAGATCTTATGGAGAAGGAGAGGCTTGTTCGGATGATAGGCAATAAAGAGATATATCAAGAGAGAGTTGTCAGTCATCGTCAAGCAGAATTTAACAGATTGAGACGGGAAAGGGAAGAGCGCATCTCTAGGATTTTAGAGTCCAGGAGACAGGAGAGGGAAAAAATAAGGAAGTTGAAATTTTATTTGAAGTTAGAAGAAGAGAAACAGGAAAAATTGCGCGCGGAGGAGGAGGCACGGAAACTAGAAGAGACTGAAAGGCGAAAGAAGGAAGAGGCTGAACGCCTGGCGAAATTAGCTGAGATAGCTGAAAAACAGAGACAGAGAGAGCAGGAACTTGAAGAAAAGGAGAGAAAGAGAAGAGAAGAATTGTTGGGCCGATCCACTGAAGCAGCTTTGAAGACTTCTGAGCCTCTTGCTCGTCCACCTGACTCTGTATCTGCTGCTCCTGCTGCAGCTGCTGCAGCACCAACTGCTGGGAAATATGTTCCTAAGTTCCGGCGTGAGAGGACTGAAGGCACAGGTGCTACTCCTCCTCCTCCGGAAACAGATCGTTGGACTAAGCCAGAAAGTGGTGACAGGTGGCGTAGTGGTGATGATCGGAGACCCTCTGCATTTGGTTCTGGTTCAAGGGGTTCATCCACCTGGTCATCCTCCAGGAACCGTTGA 2871 0.4392 MTQFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLEKIMLKYIDLCVEMRKGRYAKDGLIQYRIICQQVNVGSLEEVIKHFIHLSTEKAEHARSQAEELEAALDVDDLEADKKPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELGLWQEAFRSVEDIHGLMCLVKKTPKASLLVVYYAKLTEIFWISSSHLYHAYAWFRLFVLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHSHGASHLELEHEKERNLRIANLIGFNLETKPESREVLSRSSLLAELVSKGVMSYVTQEVKDIYHLLEHEFLPSDLALKVQPLLTKISKLGGKLSTASSVPEVQLSQYVQALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVIFCKVSLESDGLRDHLANFAEQLNMARQMIYPPERKPSKLGALLPSLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKKLRLQKITEEAEQRRLAAEYEQRKNQRILREIEERQMEETQALLQEAEKRIKKKGKKPIIEGDKMSKQTLMELALTEQVRERQEMEKKLQKFAKTMDYLERAKREEAAPIIEAAYQQRLVEERILHEHEQQKEVELSQQRHEGDLMEKERLVRMIGNKEIYQERVVSHRQAEFNRLRREREERISRILESRRQEREKIRKLKFYLKLEEEKQEKLRAEEEARKLEETERRKKEEAERLAKLAEIAEKQRQREQELEEKERKRREELLGRSTEAALKTSEPLARPPDSVSAAPAAAAAAPTAGKYVPKFRRERTEGTGATPPPPETDRWTKPESGDRWRSGDDRRPSAFGSGSRGSSTWSSSRNR 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1850 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 907 IPR027512 GO:0005852
Lal1g1850 956 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 927 IPR027512 GO:0005852
Lal1g1850 956 MobiDBLite consensus disorder prediction 839 862 - -
Lal1g1850 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 907 - -
Lal1g1850 956 MobiDBLite consensus disorder prediction 920 935 - -
Lal1g1850 956 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lal1g1850 956 Coils Coil 667 694 - -
Lal1g1850 956 Gene3D - 353 510 - -
Lal1g1850 956 Gene3D - 268 342 - -
Lal1g1850 956 MobiDBLite consensus disorder prediction 839 956 - -
Lal1g1850 956 MobiDBLite consensus disorder prediction 806 827 - -
Lal1g1850 956 MobiDBLite consensus disorder prediction 941 956 - -
Lal1g1850 956 Pfam PCI domain 373 508 IPR000717 -
Lal1g1850 956 Gene3D UVR domain 217 267 - -
Lal1g1850 956 SMART PINT_4 441 532 IPR000717 -
Lal1g1850 956 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lal1g1850 956 Coils Coil 561 602 - -
Lal1g1850 956 Coils Coil 93 120 - -
Lal1g1850 956 Coils Coil 622 649 - -
Lal1g1850 956 Coils Coil 796 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1850 Lal-Chr1 20786407 20792984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1850 1 956 Eukaryotic Initiation Factors Gene Family AT4G11420 71.312 0.0 1312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1850 K03254 - gmx:100803796 1399.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1115 11 14890637 14897658 Lal1g1850 1 20786407 20792984 LSH