Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1849 ATGGATGGTGATACACAAAAATGGTTTGAAAGAATGAAACCATTTCTAGCAGTAGTGTTCTTGCAATTTGGATTTGCTGGAATGGATGTTCTAACAAAAGCTGCACTAAACAAAGGAATGAGCAATTATGTACTTGTTGTGTATCGTCATGCTGTTGCATTCATTGTCATAACCCCTTTTGCAATTATTCTAGACAAGAAAGTAAGAGTGAAGATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGTGTCCTAGAGCCAGTTATTGACCAGAATTTATATTTTTTGGGAATGAAATATACAACAGCAACATTTGCAGCTGCAATGAGCAATATGCTTCCTGCTATTACCTTCGTTATGGCTTGCATTATTAGGATTGAGAAGATAAACATAAAAAGTATACGCAGTCAAGCAAAGGTGGTTGGAACTATAGCCACTGCTGCAGGTGCCATGGTCATGACATTGTTAAAAGGCCCAACATTTCAATTTTTTGGGACACATGGAAACAATTTTCATAATCTCCAAAATGGTGGGGCAAATATTCAACATTCAATAAAGGGTTCAATCATGATCACAATTGGATGCTTTAGTTGGGCTGGCTTCATGGTTCTCCAATCTATTACCCTTGAAGCCTACCCTGCTGAGCTATCTCTTACAGCATGGATATGTTTATTGGGAACAATTGAAGGTGGCATAGTGGCCCTAGTTATGGAAAGGGGTAACCCTTCTATTTGGTCTCTGAATTGGGATACAAAACTACTAGCTGCTGTTTATAGTGGTATAGTTTGTTCAGGACTGGCTTATTACATACAAGGAGTAGTGATGAGAACTAGAGGCCCTGTCTTTGTAACAGCATTTAGTCCTCTCTGCATGGTAATTGTGGCCATCTTGGGATCCTTTATTCTTGCTGAACAAATGTTCCTTGGAAGGGTTATTGGTGCCATTATCATTATTTTTGGGCTGTACCTAGTGGTATGGGGTAAGAGCAAAGATTACAATCCACCAAGTCCAATCATCAAAGAGTTGAGTCCAATTACTTCAGAGCATATATTACCAACAAAGCAAATTGTAGAAGAGGGCAATGCAACAAAGAACCATTTTCCTATCATAGCTAGAGATGAACAAGTATGA 1134 0.3862 MDGDTQKWFERMKPFLAVVFLQFGFAGMDVLTKAALNKGMSNYVLVVYRHAVAFIVITPFAIILDKKVRVKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFVMACIIRIEKINIKSIRSQAKVVGTIATAAGAMVMTLLKGPTFQFFGTHGNNFHNLQNGGANIQHSIKGSIMITIGCFSWAGFMVLQSITLEAYPAELSLTAWICLLGTIEGGIVALVMERGNPSIWSLNWDTKLLAAVYSGIVCSGLAYYIQGVVMRTRGPVFVTAFSPLCMVIVAILGSFILAEQMFLGRVIGAIIIIFGLYLVVWGKSKDYNPPSPIIKELSPITSEHILPTKQIVEEGNATKNHFPIIARDEQV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1849 377 Pfam EamA-like transporter family 16 152 IPR000620 GO:0016020|GO:0016021
Lal1g1849 377 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Lal1g1849 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Lal1g1849 377 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Lal1g1849 377 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Lal1g1849 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1849 Lal-Chr1 20761279 20768588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1849 6 367 Nodulin-like Gene Family AT2G37460 62.155 2.09e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1849 - - gmx:100777050 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1849 1 20761279 20768588 Lal1g1849 1 20761279 20768588 ECH
Lal1g1849 1 20761279 20768588 Lal13g1096 13 8292547 8296309 PCT
Lal13g1096 13 8292547 8296309 Lal1g1849 1 20761279 20768588 PCT