Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1828 ATGGGAAAGAAGGGAAATTTGTTTTCAATTGTGAAGAAAGTTCTCAGCCCTGATTCAAAGGAAAAGAAGGATCAAAAATCAAGTTCATCTAAGAAGAAATGGTTTAGGAAGCAAAAGTTGCAGACTTTAGAAGATTCATGCTCAGGAACTGATAAATCACCAGCTTTTCCTCCACTAGAAGAGATTAAATCAACTCATAATGAAAATAATAGCAATCATGATAATGTTGTTGAAGTTGCAACAACCTTGGTTGTTAAGGAATCTGTTTCAGTTCCTGCTGTTCAAACAACAACTGTTAAGGTTGAAAGTCCTAAAATTGCTCAGTTTTCCAGTAAATCAAAGGACAAAGTGGCAGCAATCAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTGCATGCTTTAAGAGGGCTGGTGAGGTTGAAATCATTGATGGAAGGCGGCATTGTAAAACGACAAGCCACGAGTACCCTCCGCTCAATGCAGACTCTAGCTCGCGTGCAATCTCAGATTCGCTCGAGGAGGATCAGAATGATAGAGGAGAATCAGGCGCTGCAGAGACAGCTCTTACATAGGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATCACAGCTTACAATCAAAAGAACAAATTGAAGCTAAGTTACTAAGCAAGCATGAGGCTACTATGAGAAGAGAAAGAGCACTAGCTTATGCATTCAGTCATCAGCAAAACGGGAAGAACATGTGTCGATCTATAAATCCAATGTTCATGGATCCCACCAATCCTAGCTGGGGTTGGAGCTGGTTGGAACGATGGACAGCCGCTCGAACTTGGGAGGCCCGTAGTCTGATGGATAAAGACCTGAACGACCGCTCATCTGTAAGAAGTTCAAGCCGCAACGACACTGGTGCAGAAATCAGCAAATCATTTGCACATTTCCAACTCAATTCTGAAAAGCATTCTCCAACAGCCACCCAAAGGCCTGCCTTCCCTAACTTCCAGTCCAATCCAACTCCTTCCAAGCCGCCTTCTCCATTAACTGCTAAGAATATGAAGAAGGCGAGCCTGAAAGGAAGCTGGGTTATGGATGATGACTCGAAAAGCATGGTCAGTGTACAATCCGACCGGTTCAGGAGGCATTCCATTGCTAGTTCATCAGTGAGAGATGATGAGAGCCTCGCTAGCTCTCTGTCCGTTCCAAGTTACATGGTGCCGACTCAATCTGCAAAAGCTAAGTCTAGGACACAAAGTCCATTAGCCACAGAAAATGGTGAGGCAGAGAAAGGGTCCTTCGGGACTGCAAAGAAACGTCTTTCTTACCCAGCTTCACCTGCCAGACCAAGGCGGCATTCAGGTCCATCAAAGGTAAATGCAGAATTCACTGCAGCCAGTAGTGTGGCCAGTTGA 1413 0.4466 MGKKGNLFSIVKKVLSPDSKEKKDQKSSSSKKKWFRKQKLQTLEDSCSGTDKSPAFPPLEEIKSTHNENNSNHDNVVEVATTLVVKESVSVPAVQTTTVKVESPKIAQFSSKSKDKVAAIKIQTAFRGYLARRALHALRGLVRLKSLMEGGIVKRQATSTLRSMQTLARVQSQIRSRRIRMIEENQALQRQLLHRHAKELESMRIGEEWDHSLQSKEQIEAKLLSKHEATMRRERALAYAFSHQQNGKNMCRSINPMFMDPTNPSWGWSWLERWTAARTWEARSLMDKDLNDRSSVRSSSRNDTGAEISKSFAHFQLNSEKHSPTATQRPAFPNFQSNPTPSKPPSPLTAKNMKKASLKGSWVMDDDSKSMVSVQSDRFRRHSIASSSVRDDESLASSLSVPSYMVPTQSAKAKSRTQSPLATENGEAEKGSFGTAKKRLSYPASPARPRRHSGPSKVNAEFTAASSVAS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1828 470 MobiDBLite consensus disorder prediction 319 336 - -
Lal1g1828 470 MobiDBLite consensus disorder prediction 319 362 - -
Lal1g1828 470 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Lal1g1828 470 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Lal1g1828 470 MobiDBLite consensus disorder prediction 14 57 - -
Lal1g1828 470 MobiDBLite consensus disorder prediction 384 470 - -
Lal1g1828 470 MobiDBLite consensus disorder prediction 389 425 - -
Lal1g1828 470 Gene3D - 33 142 - -
Lal1g1828 470 SMART iq_5 114 136 IPR000048 GO:0005515
Lal1g1828 470 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 467 - -
Lal1g1828 470 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1828 Lal-Chr1 20607535 20611714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1828 1 458 IQD Protein Family AT5G03040 49.683 2.95e-130 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1828 - - gmx:100800080 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1828 1 20607535 20611714 Lal1g1828 1 20607535 20611714 ECH
Lal11g1146 11 15173882 15177489 Lal1g1828 1 20607535 20611714 LSH
Lal1g1828 1 20607535 20611714 Lal20g0082 20 536142 540096 LSH
Lal1g1828 1 20607535 20611714 Lal12g0933 12 7857020 7861919 PCT
Lal1g1828 1 20607535 20611714 Lal24g0862 24 7006378 7012489 PCT
Lal12g0933 12 7857020 7861919 Lal1g1828 1 20607535 20611714 PCT
Lal24g0862 24 7006378 7012489 Lal1g1828 1 20607535 20611714 PCT