Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1824 ATGGCCGATGTTAAGGATTCTGGACCCAAAGGGTTCAACCCAGGGTTGATAGTTCTCCTTGTTGTTGTTGGGTTGCTATTGACATTCCTCATTGGAAACTATGTGCTCTACCTATATGCACAGAAGACCATCCCTCAAAGAAAGAAGAAGCCAATCTCAAAGAAGAAGCTGAAGAAAGAGAGATTGAAGAAAGGTGTTTCTGCACCAGGAGAGTAG 216 0.4352 MADVKDSGPKGFNPGLIVLLVVVGLLLTFLIGNYVLYLYAQKTIPQRKKKPISKKKLKKERLKKGVSAPGE 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1824 71 PANTHER DNA-BINDING PROTEIN S1FA2 3 71 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal1g1824 71 Pfam DNA binding protein S1FA 9 71 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal1g1824 71 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 71 - -
Lal1g1824 71 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1824 Lal-Chr1 20582205 20584358 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Lal1g1824 S1FA 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1824 - - gmx:100499820 89.7373