Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1810 ATGAAGGGCAAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAATGGGGAGTCACATCATACCTTGTGCTGCCTGTGAGTATTGCTGTCATTGGGCAATGTGGTCCTCCAAGCATGAAAGTTGCTTCATCCCAAATGATGTCCCAAAGGGTCACTTGGTTGTCTATGTCGGAGAGAATCACAAGAGATTTGTCATCAAGATTGCAATACTAAATCATCCACTCTTCAAAGCCTTGCTGGATCAAGCTCGGGAAGAATATGACTTCACTGCAGCAGACTCAAAGCTTTGTATTCCTTGCAATGAGCATCTTTTCCTCAGTGTTCTTCGCTGTGCAACCTCACCACAGAACGAGAGGGTGTTTTTGTGTCTCTGA 375 0.448 MKGKFLRGCLNKWKKMGSHIIPCAACEYCCHWAMWSSKHESCFIPNDVPKGHLVVYVGENHKRFVIKIAILNHPLFKALLDQAREEYDFTAADSKLCIPCNEHLFLSVLRCATSPQNERVFLCL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1810 124 Pfam Auxin responsive protein 42 111 IPR003676 GO:0009733
Lal1g1810 124 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 124 - -
Lal1g1810 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1810 Lal-Chr1 20441956 20442330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1810 46 119 Calmodulin-binding Proteins AT4G34750 46.154 9.33e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1810 K14488 - jre:109018217 204.142