Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1806 ATGGAGGTTCAAAAGAAGAAGATGCTAAAGTCTATGATCACAAAGGTACTAAAGGGTCTTCAATTCTGGGCATACAATGAAGCTTTGCCAAGAAGAGCTTATACAATTAGTGACAATAATATTGATGATGAAAATGAAGCAGTAGCAGCAACAATGGTGCCAAAAGATGTTAAAGAAGGACATTTTGCAGTGATAGCAATCCAAGGTGAAGAAGCAAAAAGGTTCATTGTTGAGTTAGATTACTTAACTGACCCTGATTTCTTGAGACTCTTGGAACAAGCTAAGGAAGAATTTGGATTTCAACAAAAGGGTGCTCTTGCTATTCCTTGCAGGCCTCAAGAACTTCAGAAGATTATAGAGAATCGACAAGTCAACAACACTATTGTGTAA 390 0.3718 MEVQKKKMLKSMITKVLKGLQFWAYNEALPRRAYTISDNNIDDENEAVAATMVPKDVKEGHFAVIAIQGEEAKRFIVELDYLTDPDFLRLLEQAKEEFGFQQKGALAIPCRPQELQKIIENRQVNNTIV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1806 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 125 IPR003676 GO:0009733
Lal1g1806 129 PANTHER F8A24.8 PROTEIN 8 125 - -
Lal1g1806 129 Pfam Auxin responsive protein 38 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1806 Lal-Chr1 20415584 20415973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1806 40 110 Calmodulin-binding Proteins AT5G20810 46.479 1.89e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1806 - K14488 gmx:102661602 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1806 1 20415584 20415973 Lal1g1806 1 20415584 20415973 ECH
Lal1g1806 1 20415584 20415973 Lal20g0106 20 690063 690443 LSH