Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1803 ATGCAAATGTCACAAGAAGAAGATTCTTGTTCTAACACTATTGAGCAGTGGAAATGGTCTGAAATGCAAGGCATTGAGCTTAATTCTCAATCTCCTACACCAAACCAAGAAATGGATACTTCTCTATCTCAACAACCCAACAAAGATGTTGATGGTGCTGTTGATGATGTTATTGCTAATGGCGGTGATGGTAATGGTAACAACAGTAATAGTAGTGGAGAGAAGAAGAAAACAAAGGCTGAGAGTGTTCCTCCTATAGGGTTTGTTAGTCTTTTCAGATTTGCTGATGGGTTGGATTACATTCTCATGGCAATTGGAACTGTTGGAGCTGTTGTACATGGTTGTTCTTTGCCTCTCTTCCTTCGATTCTTCGCCGATCTTGTTAATTCTTTTGGTTCCAATGCTAATGATGTTAACAAAATGACCCAGGAAGTTGTCAAGTATGCATTTTACTTCCTTGTGGTTGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATTTCATGTTGGATGTGGACCGGGGAGCGGCAATCAACCAAGATGAGGATCAAGTATCTGGAAGCTGCTTTGAACCAGGACATTCAGTTCTTCGACACTGAGGTTCGAACATCCGATGTTGTTTTCGCAATCAATACTGATGCTGTCATGGTCCAAGATGCTATTAGTGAGAAGGTTGAGCACATCCTAGTTTTGGGTAATTTCATTCACTATATGGCAACATTTGTTTCTGGTTTTGTTGTGGGTTTTACTGCTGTATGGCAATTGGCTCTAGTAACCCTTTCTGTAGTCCCTATGATAGCTGTGATTGGAGCCATTCACACCATCACCTTGGCCAAGCTCTCTGGAAAAAGCCAGGAATCTCTTTCTCAAGCCGGCAACATCGCGGAACAGACGGTTGCACAAATTCGAGTCGTGCTGGCCTTTGTTGGAGAATCGAGAGCATCACAGGCCTACTCATCAGCATTGAAGGTTGCTCAGAAGCTTGGTTACAAAACTGGGTTTGCAAAGGGAATCGGATTGGGTGCCACTTACTTTGTTGTTTTCTGCTGTTATGCACTTCTGCTATGGTATGGAGGCTATCTGGTTAGGCACCACTATACCAATGGAGGACTTGCCATTGCCACCATGTTTGCCGTTATGATTGGTGGATTGGGTTTAGGCCAGTCTGCGCCAAGCATGGCTGCATTTACCAAGGCTAGAGTTGCTGCAGCCAAAATTTTCCATATAATTGATCACAAGCCGAGTATAGACCGAAACAGTGAATCTGGCTTGGAACTAGAGAGTGTTATGGGACTTGTGGAGCTGAAAAATGTAGACTTTTCATATCCATCGAGACCAGACATTCGGATCCTTGATGATTTTTCGTTGAATGTGCCTTCTGGCAAGACTATAGCTTTGGTGGGTAGCAGTGGTTCCGGCAAGAGTACTGTTGTTTCCCTCATTGAAAGGTTTTATGACCCAACTTCAGGACAAGTTCTGTTAGATGGGCATGACATAAAAACATTGAAGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAACCGGCGCTATTTGCTACGACAATTCGTGAAAATATACTATTGGGCAGGCCAGATGCAGACCAGGTTGAGATCGAAGAAGCTGCCAGGGTTGCTAATGCTCATTCCTTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAGAGAGGGCTTCAACTTTCAGGAGGACAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTCCTGGATGAGGCAACAAGTGCACTGGACTCTGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATTCGCAAAGCCGACCTCGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTTTTTTCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCGCATGAAACTGCTATGAGTAATGCAAGAAAGAGTAGTGCAAGACCTTCAAGTGCGAGAAACTCTGTAAGCTCACCCATAATTACTCGAAATTCTTCTTATGGCCGGTCACCATACTCACGCAGGCTGTCTGATTTCTCCACTTCTGATTTTAGTCTGTCCCTTGATGCATCACATCCGAATTACAGGCACGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCTTTCTGGAGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCTTTTATTGGCTCTATAGGTTCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTGTATTACAATCCAGACCACAGATTCATGATCCGGCAAATAGAGAAGTACTGCTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTTAACACATTACAACACTTCTTTTGGGATATTGTTGGGGAAAATCTCACAAAACGAGTGAGGGAGAAAATGCTGACAGCAGTGCTACAAAATGAAATGGCGTGGTTTGATCAAGAGGAAAATGAGAGTGGCAGGATAGCTGCTAGGCTCTCTCTCGACGCCAATAATGTCAGATCAGCCATTGGAGATAGAATTTCAGTAATTGTGCAGAACACTGCACTTATGTTAGTTGCCTGCACTGCAGGGTTTGTGTTGCAATGGCGCCTTGCTCTTGTCCTTGTAGCTGTCTTCCCTGTTGTTGTTGCCGCCACTGTTTTGCAGAAAATGTTCATTACTGGTTTCTCTGGTGACATGGAAGCTGCTCATGCCAAGGCCACACAACTAGCAGGAGAGGCTATAGCCAATGTGAGAACTGTTGCAGCCTTCAACTCAGAAACAAAGATTATTCACCTTTTCACATCCAACCTTGAGACTCCGCTAAAACGATGCTTCTGGAAGGGACAAATCTCTGGAATTGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGTATCTCGGATTTCTCTAGAACAATCCAAGTTTTTATGGTTCTCATGGTCTCTGCTAATGGTGCTGCTGAAACCTTAACCCTGGCTCCTGACTTTATCAAGGGAGGTAGAGCCATGAAGTCAGTCTTTGAGCTCCTTGACCGCAGAACTGAAATTGAGCCAGATGATCCTGATGCTACTCCTGTACCTGATCGCCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCTTATCCTACTCGACCAGACATGCCAGTTTTTCGCGACCTTAGTCTTCGTGCTAGAGCAGGTAAGACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAAAGTTCAGTCATTGCACTTATACAACGTTTCTATGATCCGACATCCGGCCGGGTCATGATTGATGGAAAGGACATCAGGAAATACAACCTTAAATCCCTAAGAAGGCACATTTCGGTGGTACCTCAGGAGCCGTGCCTATTCGCAACTACAATTTATGAAAACATTGCTTATGGTCATGACTCAGCTACTGAAGCTGAGATAATTGAAGCTGCAACTCTTGCTAATGCACACAAGTTCATATCGTCCCTGCCAGATGGATACAAAACATTTGTCGGCGAGAGAGGGGTTCAACTATCTGGTGGACAAAAACAGCGAATAGCGGTTGCTCGTGCTTTTGTGAGGAAGGCTGAGCTTATGCTTCTTGATGAGGCAACTAGTGCACTCGATGCTGAATCCGAGAGGTCTGTTCAAGAGGCTCTAGGCCGTGCCTCATCGGGAAAAACAACTATCATTGTTGCACACAGGTTATCAACTATCAGGAATGCTAATATAATTGTTGTGATTGATGATGGGAAAGTAGCTGAGCAAGGTTCACATTCACATTTGTTGAAAAATTACCCGGACGGGATTTATGCACGGATGATTCAACTACAAAGGTTCACACACAACCAAGTCATTGGAATGGCCACAGGCTCAAGTTCTTCAATGAAACAAAAAGATGATGAAAGAGAAGGCTAA 4065 0.4406 MQMSQEEDSCSNTIEQWKWSEMQGIELNSQSPTPNQEMDTSLSQQPNKDVDGAVDDVIANGGDGNGNNSNSSGEKKKTKAESVPPIGFVSLFRFADGLDYILMAIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVNKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKVEHILVLGNFIHYMATFVSGFVVGFTAVWQLALVTLSVVPMIAVIGAIHTITLAKLSGKSQESLSQAGNIAEQTVAQIRVVLAFVGESRASQAYSSALKVAQKLGYKTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFHIIDHKPSIDRNSESGLELESVMGLVELKNVDFSYPSRPDIRILDDFSLNVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRHEKLAFKEQASSFWRLAKMNSPEWLYAFIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHRFMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLQNEMAWFDQEENESGRIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFITGFSGDMEAAHAKATQLAGEAIANVRTVAAFNSETKIIHLFTSNLETPLKRCFWKGQISGIGYGIAQFALYASYALGLWYASWLVKHGISDFSRTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFELLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALGRASSGKTTIIVAHRLSTIRNANIIVVIDDGKVAEQGSHSHLLKNYPDGIYARMIQLQRFTHNQVIGMATGSSSSMKQKDDEREG 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1803 1354 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 103 1331 IPR039421 -
Lal1g1803 1354 Pfam ABC transporter 1107 1255 IPR003439 GO:0005524
Lal1g1803 1354 Pfam ABC transporter 451 600 IPR003439 GO:0005524
Lal1g1803 1354 Gene3D ABC transporter type 1, transmembrane domain 150 1061 IPR036640 GO:0005524|GO:0016021
Lal1g1803 1354 SMART AAA_5 460 646 IPR003593 -
Lal1g1803 1354 SMART AAA_5 1115 1301 IPR003593 -
Lal1g1803 1354 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 765 1052 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g1803 1354 MobiDBLite consensus disorder prediction 679 711 - -
Lal1g1803 1354 ProSitePatterns ABC transporters family signature. 572 586 IPR017871 GO:0005524
Lal1g1803 1354 Gene3D - 431 696 IPR027417 -
Lal1g1803 1354 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 398 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g1803 1354 MobiDBLite consensus disorder prediction 21 79 - -
Lal1g1803 1354 CDD ABC_6TM_Pgp_ABCB1_D1_like 103 406 - -
Lal1g1803 1354 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 669 IPR003439 GO:0005524
Lal1g1803 1354 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1088 1324 IPR003439 GO:0005524
Lal1g1803 1354 Pfam ABC transporter transmembrane region 766 1035 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g1803 1354 Pfam ABC transporter transmembrane region 104 382 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal1g1803 1354 Gene3D - 1079 1334 IPR027417 -
Lal1g1803 1354 MobiDBLite consensus disorder prediction 21 48 - -
Lal1g1803 1354 CDD ABC_MTABC3_MDL1_MDL2 1088 1327 - -
Lal1g1803 1354 CDD ABC_6TM_Pgp_ABCB1_D2_like 754 1070 - -
Lal1g1803 1354 CDD ABC_MTABC3_MDL1_MDL2 433 672 - -
Lal1g1803 1354 ProSitePatterns ABC transporters family signature. 1227 1241 IPR017871 GO:0005524
Lal1g1803 1354 SUPERFAMILY ABC transporter transmembrane region 752 1075 IPR036640 GO:0005524|GO:0016021
Lal1g1803 1354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1079 1327 IPR027417 -
Lal1g1803 1354 SUPERFAMILY ABC transporter transmembrane region 91 417 IPR036640 GO:0005524|GO:0016021
Lal1g1803 1354 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 103 1331 - -
Lal1g1803 1354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 672 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1803 Lal-Chr1 20374931 20381078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1803 76 1349 Calmodulin-binding Proteins AT2G36910 87.922 0.0 2303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1803 K05658 - gmx:100814667 2299.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1803 1 20374931 20381078 Lal1g1803 1 20374931 20381078 ECH