Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1783 ATGGTTCTCAAGACTGAACTTTGCCGATTCAGTGGTGCTAAGATCTACCCAGGGAGAGGGATTAGATTTATTCGTGGTGACTCACAGGTGTTCCTCTTTGTGAACTCAAAATGCAAGAGATACTTTCACAACCGTTTGAAGCCATCGAAGCTCACCTGGACTGCCATGTTTAGGAAGCAACACAAGAAGGATGCTGCTCAAGAAGCTGTGAAGAAGAAGCGCCGTGCCACCAAGAAGCCATACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATTCAGAGGAAAAGAACTGAGAAGCCAGAAGTTCGAGATGCTGCAAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATAAAAAAGACCAAGGATGAGAAGAAGGCTAAAAAGGCAGAAGTAACTGCCAAGTCACAAAAGACAGGCAAGGGTAATGTTTCAAAGGGTGCAGCACCTAAAGGTCCCAAACTTGGTGGCGGTGGTGGGAAACGCTAA 492 0.4593 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKKRRATKKPYSRSIVGATLEVIQRKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKSQKTGKGNVSKGAAPKGPKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1783 163 MobiDBLite consensus disorder prediction 117 163 - -
Lal1g1783 163 MobiDBLite consensus disorder prediction 117 136 - -
Lal1g1783 163 Coils Coil 112 136 - -
Lal1g1783 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Lal1g1783 163 Gene3D - 69 138 - -
Lal1g1783 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 - -
Lal1g1783 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lal1g1783 163 SMART 4TRASH 8 46 IPR011017 -
Lal1g1783 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Lal1g1783 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Lal1g1783 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Lal1g1783 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1783 Lal-Chr1 20196386 20198313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1783 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.713 1.34e-86 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1783 K02896 - thj:104826938 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1783 1 20196386 20198313 Lal1g1783 1 20196386 20198313 ECH
Lal11g1190 11 15659939 15663128 Lal1g1783 1 20196386 20198313 LSH