Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1781 ATGGAACCTAATGGTCTAAGTAGTGGAATGTTTTCTTGTTTGGTAGAAAACCCTTCAAAACAACAGCAACAACAACAAAACCTTCAAAATCAGCATAACCCTCACCATCTGCATCATCACTCTCAAATGGTTTCCTATGCTTCAAACCATGACACTGACACAAATCCACAACCACAACAATCAATCAAACATGGGTATAATAACCCCTTTTCATCCAAGACCAACAACAACAACAACAAGCCACAAAGCACTAACATGAGTGATGAAGATGAGCATGTGTTTACAGCAGATGATAGCTCTGGTGACAAGAGGAAAGTGTCACCATGGCATAGAATGAAGTGGACTGATGCAATGGTAAGGCTCTTAATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTACTTCAGAAGGTACTACTACTCATGATTCCATGGGGAAAAAGAAAGTTGCTGGTTTAATGCTTCAGAAGAAAGGGAAATGGAAATCAGTGTCAAGGGCTATGATGGAGAAAGGAATCTATGTATCTCCTCAACAATGTGAAGACAAGTTCAATGACTTGAACAAGAGATATAAGAGAGTCAATGACATTCTAGGCAAGGGAACTGCATGTAGGGTTGTGGAAAATCAAAACTTGATGGATACAATGGATTTGTCACCAAAGTTGAAAGAAGAAGTTAGAAAGCTTCTCAACTCCAAACACCTTTTCTTTAGAGAAATGTGTGCTTACCATAATAGTTGTGGTCATGGAAGTAACAACAACATCACTGGTTCTAGTTCTACTTTGCAACATTCAGCAGAAGTTGTAAGTGTAACTGAGCCGTCACAAACTCAGTCACAACAGCAACAGCAACATCAACAGCAATGTTTTCATTCATCAGAGAATGGTGTTGGGAGTACTATGAGGATGTTGAAAGGAAGAAGTGGTGGAGAATTAGAAGATGAGTCTGATGAATCTGATGAGTCTAGTGAGTATTCTGATGAGGAAGAAGATGAGTCAACTGAAGTTGGATCAAGGGGTCAAGTAGATCATGAAGATGAAGTTGAAGTAAGAAAAAGAATAAAGAAAGGAGGGTTATTATATGTGGCATCATCATCAACAATACAAAGTTTGAGTAGTGAGTTGAAAGGAGTGTTGCAAGATGGAGGGAAAAGTGTTATGGAGAAAAAAGTGTGGATGAAGAAGAGGGTGATGCAGTTAGAGGAGGAGCAAGTGAGTTATCATGTGAAATCATTTGAGCTTGAAAAACAAAGGTTGAGATGGGTAAGGTATAGTAGCAAGAAAGAGAGAGGAATGGAGAGAGATAAACTTGAAAATGAAAGAAAGAGGTTGGAAAATGAGAGAATGGTTTTGATCATTAGACAAATGGAGATTGAGTTGATGAATGTTCAGCACCAGAAGCAACAGCAGCAGCAACATTCTTCTACCTAG 1431 0.3885 MEPNGLSSGMFSCLVENPSKQQQQQQNLQNQHNPHHLHHHSQMVSYASNHDTDTNPQPQQSIKHGYNNPFSSKTNNNNNKPQSTNMSDEDEHVFTADDSSGDKRKVSPWHRMKWTDAMVRLLIMAVYYIGDEAGTSEGTTTHDSMGKKKVAGLMLQKKGKWKSVSRAMMEKGIYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLMDTMDLSPKLKEEVRKLLNSKHLFFREMCAYHNSCGHGSNNNITGSSSTLQHSAEVVSVTEPSQTQSQQQQQHQQQCFHSSENGVGSTMRMLKGRSGGELEDESDESDESSEYSDEEEDESTEVGSRGQVDHEDEVEVRKRIKKGGLLYVASSSTIQSLSSELKGVLQDGGKSVMEKKVWMKKRVMQLEEEQVSYHVKSFELEKQRLRWVRYSSKKERGMERDKLENERKRLENERMVLIIRQMEIELMNVQHQKQQQQQHSST 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1781 476 MobiDBLite consensus disorder prediction 42 84 - -
Lal1g1781 476 Pfam Myb/SANT-like DNA-binding domain 111 242 IPR044822 -
Lal1g1781 476 MobiDBLite consensus disorder prediction 313 334 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 17 32 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 335 349 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 254 349 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 254 299 - -
Lal1g1781 476 Coils Coil 427 473 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 17 106 - -
Lal1g1781 476 PANTHER F16F4.11 PROTEIN-RELATED 1 476 - -
Lal1g1781 476 MobiDBLite consensus disorder prediction 85 106 - -
Lal1g1781 476 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 476 - -
Lal1g1781 476 Gene3D - 114 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1781 Lal-Chr1 20182795 20184225 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal1g1781 Myb_DNA-bind_4 1.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1781 - - aprc:113863792 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1781 1 20182795 20184225 Lal1g1781 1 20182795 20184225 ECH
Lal1g1781 1 20182795 20184225 Lal12g1037 12 9634498 9635970 PCT
Lal1g1781 1 20182795 20184225 Lal24g0948 24 7997587 7999110 PCT
Lal12g1037 12 9634498 9635970 Lal1g1781 1 20182795 20184225 PCT
Lal24g0948 24 7997587 7999110 Lal1g1781 1 20182795 20184225 PCT