Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1778 ATGCACCTTGTTTTGACATTGACCTTGGTCTTGGCCTTTCTGTGCTTCACACTATCTCATGCACAGAATGACAATGACACTAATGCCCTCACCCAATTCCTCCTCCAAACCGACCCCCACGGCTACCTCCTCCCCAACTGGACCGGCAACGACGCTTGCGCCGCCGCATGGCGCGGCGTCACATGCTCCCCAAACGGCAGAGTCATTGAACTCTCTCTCCCTTCACTCAACCTCCAAGGCCCTATTCATTCTCTCTCAACACTCTCCTATCTCCGATTCCTTGACCTTCACGACAACCGCTTAAACGGCACCGTTGCACCTCTTTTCAACTGCACCAGCCTTGAACTTCTCTACCTCTCCGGCAACAACTTCTCCGGCGATATTCCACCGGAGATATCTTCTCTTAAACTTCTCCTACGACTTGATATCTCTAGCAACAACATCAATGGTTCACTACCCAAAGAAATATCACATTTAACTCATCTTCTTACGTTAAGGTTACAAAACAATGTTCTTTCTGGAAATGTTCCAGATCTTTCTTCTTCTCTTGTTAACCTCAACGAACTCAACTTCACTAATAATGAACTACATGGGTACTTGCCTGATCCCATGTTTAACAAGTTCGGTAACGCAAGCTTCTTTGGTAATAATGGTCTTTGTGGTTCACCACCATTACCGTTTTGTCATATCTCTCCATCTCCTGAATCAAATAAAACTGTTTCTTCTCACCCTAGTTCACTTCCTCAAACAAGTGTTCTTGCTCCTTCTTCTTCTAAAGCTCAACCGCGTAAATGGTTGAGTCCTGGAGCCATTGTAGGCATAGTGGTGGCTATTCCGGTAGTGTTAATGGTAGTGATATCTTTCATTATTGTGCAGTGTTGTGATAGAGAGAAAGAGAGTTCAATGGTGGGGAGTGAGAGTGGGAAGAGAAAGAGTGGAAGTAGCTGTAGTGGAAGCAGTGAAAAAAGGGTTTATAACAACAATGGTGTTGTTGTTGTTGGAGATAGAGATAGTGATGGAACTAATGCTACTGAGAATAATGAAAGAAGCAAGCTTGTGTTCTTTGATAGGGGGAATGTGTTTGAGCTTGAGGATTTGCTTCGTGCTTCAGCAGAGATGTTAGGGAAAGGTGGCTTGGGAACAGTGTATAGGGCAGTGGTTGATGAAGGTGTAACTGTTGCTGTGAAGAGGTTGAAGGACACTAATCCCTTTGAGAGGGTAGAGTTTGAGCAGTATATGAATGTTGTAGAGAAGGTTAAGCATCCTAATGTTGTTAGGTTAAGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTTCCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCAGGAAGAATTCCACTAGATTGGACTACAAGACTCAGCATTGTGTTAGGTGCAGCAAAAGGACTAGCCAAAATTCATGCAGAATATAGTGCAGCAAAAATACCTCATGGCAACATCAAATCTTCCAATATTCTTCTTGACAAAAATGGTGTTGCATGCATCTCTGACTTTGGCTTATCACTGTTATTGAACCCAGTTCAGGCCATAGCAAGGTTAGGTGGGTATAAAGCACCAGAACAAGAAGAGTTAAACACACTATCTCAAGAAGCTGATGTGTATAGTTTTGGTGTATTGGTATTGGAAGTTCTTACAGGAAAAGCTCCTTCTAAGTTCCATAACTCACCAAGTAATCGTGCTCCTCGTGTTGAGTTAGAGGAACAAGATGTGAATGTTGATCTTCCCAAATGGGTTCGTGGAGTTGTGAAGCAAGAAGAGTGGACTAAAGAGGTGTTTGATCACGAACTTTTGAGGTACAAGAACATTGAGGAAGAAATGGTAGCAATGATGAATGTAGGGTTAGCTTGTGTTATGGCACAGCCTGAGATGAGACCAAACATGTTTGAAATTGCTAAGATGATTGAGGATATGAGGGTGGAACAATCTCCTTTGAGAGAGTATTATGATGAATCACGTAGTTCAATTTCACCTTCTCTTGTCACCACTGAAGATGGGTTAACTAAAGAGTAG 2061 0.4284 MHLVLTLTLVLAFLCFTLSHAQNDNDTNALTQFLLQTDPHGYLLPNWTGNDACAAAWRGVTCSPNGRVIELSLPSLNLQGPIHSLSTLSYLRFLDLHDNRLNGTVAPLFNCTSLELLYLSGNNFSGDIPPEISSLKLLLRLDISSNNINGSLPKEISHLTHLLTLRLQNNVLSGNVPDLSSSLVNLNELNFTNNELHGYLPDPMFNKFGNASFFGNNGLCGSPPLPFCHISPSPESNKTVSSHPSSLPQTSVLAPSSSKAQPRKWLSPGAIVGIVVAIPVVLMVVISFIIVQCCDREKESSMVGSESGKRKSGSSCSGSSEKRVYNNNGVVVVGDRDSDGTNATENNERSKLVFFDRGNVFELEDLLRASAEMLGKGGLGTVYRAVVDEGVTVAVKRLKDTNPFERVEFEQYMNVVEKVKHPNVVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRLSIVLGAAKGLAKIHAEYSAAKIPHGNIKSSNILLDKNGVACISDFGLSLLLNPVQAIARLGGYKAPEQEELNTLSQEADVYSFGVLVLEVLTGKAPSKFHNSPSNRAPRVELEEQDVNVDLPKWVRGVVKQEEWTKEVFDHELLRYKNIEEEMVAMMNVGLACVMAQPEMRPNMFEIAKMIEDMRVEQSPLREYYDESRSSISPSLVTTEDGLTKE 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1778 686 Gene3D Ribonuclease Inhibitor 87 235 IPR032675 -
Lal1g1778 686 Gene3D Ribonuclease Inhibitor 18 86 IPR032675 -
Lal1g1778 686 Pfam Protein tyrosine and serine/threonine kinase 372 649 IPR001245 GO:0004672|GO:0006468
Lal1g1778 686 Gene3D Transferase(Phosphotransferase) domain 1 444 672 - -
Lal1g1778 686 MobiDBLite consensus disorder prediction 233 263 - -
Lal1g1778 686 PANTHER LRR RECEPTOR-LIKE KINASE 2 676 - -
Lal1g1778 686 SUPERFAMILY L domain-like 25 222 - -
Lal1g1778 686 MobiDBLite consensus disorder prediction 662 686 - -
Lal1g1778 686 SUPERFAMILY Protein kinase-like (PK-like) 372 651 IPR011009 -
Lal1g1778 686 MobiDBLite consensus disorder prediction 306 321 - -
Lal1g1778 686 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Lal1g1778 686 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Lal1g1778 686 MobiDBLite consensus disorder prediction 301 321 - -
Lal1g1778 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 676 - -
Lal1g1778 686 MobiDBLite consensus disorder prediction 665 686 - -
Lal1g1778 686 ProSiteProfiles Protein kinase domain profile. 368 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1778 Lal-Chr1 20155986 20162190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1778 25 680 Receptor kinase-like Gene Family AT2G36570 61.343 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal1g1778 PK_Tyr_Ser-Thr 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1778 - - csv:101206843 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1778 1 20155986 20162190 Lal1g1778 1 20155986 20162190 ECH
Lal1g1778 1 20155986 20162190 Lal24g0951 24 8049903 8053845 PCT
Lal24g0951 24 8049903 8053845 Lal1g1778 1 20155986 20162190 PCT