Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1770 ATGATGGCACAAAAGTACTTACATGAGTTACTTGAGGAAGATCAAGAACCATTCCTTTTACACAAGTACATTTCAGATAAGCGTAGCAAAATTAAAACACAGATTTACCCACGAAAAAGTCACAAACCACTTCATCAAAACTCAAATTTCCCCACGAATCTATGCAAAAACGTTTGTCTTTTCTCATTCCCAGAAACAACAACAACAACCCCAGAACTCAGAAAATCTCCACTCTTCGATTTTCAATCCCCTAAAGCCAAAACAAAAAGCCCCATCAAGTTCCAAATCCCTTCTAGAACCGCAAATCTTCTTCTCGAAGCTGCTCTTAAGATTCAAAAACACTCTTCTTCTAAAACCAAAAGCACTGGGTTTGGTCTATTTGGTTCATTGTTCAAGAGACTAACACAAAGAAACCATAAAAGGAAGGAAATTGAGGGTAGTGAGTTAAATTTATGTGTGAAGGATATCTTGAAGTTGGAATCTAGAAAACTCTCAAATGGGTGCATGAAAGAGGAAGAAAAATTGGATTTTTACAATGGAAGAAGTAGTAGTTGTGTTTGGTCAGAGAGTAATGAAGACAAATCATTGGACATGGAAACATGGAGTAGCAGTAGTAGCAGACACTGTGATAATGATTGTGAAACAAAAGAGATTGAGTTTATTACCAATCATCAGAAGGATAATAATACTCACTCTGTTTTCTGTCATGATATCAATAGGTTTTGTGATAGTTTTGTTCTTCAAAACTGTCCTTTTTCCGGCCGCCACACGCCGGAGTTATCTTCGTCGGCTGCACCGTCACCTTCCCATCACAAAACTCAGGACAAAGAAAGTAATAATGGAGGAGAAGAAGAGAAAGAGGATAAGGAACAGTGTAGTCCTGTTTGTGTTTTGGATCCACTCTTCAATGATGATGAAGAAGGCCATGGAAATGATGAAGATAGTTCTAATTTGAAGTGCAGCTATGCCATTATAGAGAGAGCTAAGCAACAACTACTATACAAGCTTAGTAGATTCGAGAAACTTGCAGAGTTAGATCCATTAGAACTCGAGAAAAGAATGTTGGAGGACGAAAGCGACTATGAAACATTAATGGAAAACAATGATTATGAGGCCGAGGGTATTGAAACATCATATGAAGAAAATGAATTTATGCAACTAGTTTTTGAAGCTATGTGTCATTCAAGTGTCCATGACATAGGACAAATTCCAAAGGATCTTAAGAAGCTAGTTTATGATCTCATTATGGATGAAGATAGAGAACTTGATTCCTTAGAAGAAAAGGAGATTATGATAAAAAGGGTATGCAAGAGGGTAGAATTATGGACAGAAGTGGAATCTAACACAATTGATATGATGATAGAAGAGGATTTCACTAGAGAAGATGAAAAGTGGAAGAAAAATATGGAGGAGATAAGAGATATGGCTAGTGAAATTGAGGTAGCTATTTTTAGCCTTGTGGTGGAAGAATTTTGTGAGGAACTATCATCTATCACTATCTTTTGCAACTCTTAG 1515 0.3677 MMAQKYLHELLEEDQEPFLLHKYISDKRSKIKTQIYPRKSHKPLHQNSNFPTNLCKNVCLFSFPETTTTTPELRKSPLFDFQSPKAKTKSPIKFQIPSRTANLLLEAALKIQKHSSSKTKSTGFGLFGSLFKRLTQRNHKRKEIEGSELNLCVKDILKLESRKLSNGCMKEEEKLDFYNGRSSSCVWSESNEDKSLDMETWSSSSSRHCDNDCETKEIEFITNHQKDNNTHSVFCHDINRFCDSFVLQNCPFSGRHTPELSSSAAPSPSHHKTQDKESNNGGEEEKEDKEQCSPVCVLDPLFNDDEEGHGNDEDSSNLKCSYAIIERAKQQLLYKLSRFEKLAELDPLELEKRMLEDESDYETLMENNDYEAEGIETSYEENEFMQLVFEAMCHSSVHDIGQIPKDLKKLVYDLIMDEDRELDSLEEKEIMIKRVCKRVELWTEVESNTIDMMIEEDFTREDEKWKKNMEEIRDMASEIEVAIFSLVVEEFCEELSSITIFCNS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1770 504 MobiDBLite consensus disorder prediction 270 292 - -
Lal1g1770 504 PANTHER OS04G0572500 PROTEIN 1 497 - -
Lal1g1770 504 MobiDBLite consensus disorder prediction 257 292 - -
Lal1g1770 504 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1770 Lal-Chr1 20066950 20075117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1770 1 302 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 37.356 1.14e-40 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1770 1 20066950 20075117 Lal1g1770 1 20066950 20075117 ECH
Lal11g1204 11 15799433 15804168 Lal1g1770 1 20066950 20075117 LSH
Lal1g1770 1 20066950 20075117 Lal13g1414 13 13549759 13553673 PCT
Lal13g1414 13 13549759 13553673 Lal1g1770 1 20066950 20075117 PCT