Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1762 ATGGTGATGGGAGATTGTGAGATGAACTCCCAAGGGGATCAAGGAGAAGTTGAATCACTTGGAAGACAATCATCAATTTACTCACTCACCTTGGATGAGTTTCAAAACACACTTGTCTCTGAAAATGGCAAGAACTTTGGTTCCATGAACATGGATGAATTTCTCACTAGCATTTGGAATGCTGAAAACAACATTAACCAACCCATTAACCACAACTATAACCACAATCACAACACCGAAACTGCTTCGAGTCAGAAAGACATAACAACAATAAGGAAGCAGCCAAGTCTCCCAAGACAAGGCTCACTAACGCTTCCTGCATCACTTTGCATGAAAACAGTGGAACAAGTTTGGTCTGAGATACACCAAAAACAAAGTAGTAATGGCAATAATAGTAATAATGGGAATGTTCAGAATACCGAGTCTGCCCCTCGCCAACGAACTTTTGGAGAGATGACCTTAGAGGATTTCTTGGTTAAGGCCGGGGTAGTTAGGGAAACATGTATAATGAATCATGCACCAATGTCTCAACAACAATATGGGGTGTACACAAATAACAACACTACCATGCCACCTTTTGCTATTGGTGGTGAAGTAGGGAATGTGATTGCGCCTCCTTATACCGTGGTTTCTCACGGAGTTGGAGAATTAGGAAATGGCGGGAGGGTGGTGAATGGAGGTGGGGATGGATACATGATGGCAGTGCCATCCCCACCTAATATAGGAATTGGCGGGTCGGCATACACAGTTGAATTAGAAGCGGAACTGAATATATTAAGAGAAGAAAACAACCAACTAAAACAAGAGCTGTGTTTTGAGGATGTAAACATGAGGCTTCAAACCAAAGCTCAGAAGGCAAATGAAAAATTGAGAGCTATGAGAAGGAACCTTAGTTGTCCTTTGTGA 906 0.4216 MVMGDCEMNSQGDQGEVESLGRQSSIYSLTLDEFQNTLVSENGKNFGSMNMDEFLTSIWNAENNINQPINHNYNHNHNTETASSQKDITTIRKQPSLPRQGSLTLPASLCMKTVEQVWSEIHQKQSSNGNNSNNGNVQNTESAPRQRTFGEMTLEDFLVKAGVVRETCIMNHAPMSQQQYGVYTNNNTTMPPFAIGGEVGNVIAPPYTVVSHGVGELGNGGRVVNGGGDGYMMAVPSPPNIGIGGSAYTVELEAELNILREENNQLKQELCFEDVNMRLQTKAQKANEKLRAMRRNLSCPL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1762 301 Coils Coil 249 269 - -
Lal1g1762 301 Coils Coil 276 296 - -
Lal1g1762 301 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 188 IPR043452 GO:0003700|GO:0045893
Lal1g1762 301 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 247 300 IPR043452 GO:0003700|GO:0045893
Lal1g1762 301 MobiDBLite consensus disorder prediction 124 147 - -
Lal1g1762 301 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 247 300 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Lal1g1762 301 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 17 188 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1762 Lal-Chr1 19958541 19960829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1762 19 236 bZIP Transcription Factor Family AT2G36270 40.288 5.21e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1762 K14432 - pop:7454914 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1762 1 19958541 19960829 Lal1g1762 1 19958541 19960829 ECH
Lal1g1762 1 19958541 19960829 Lal20g0169 20 1169826 1171833 LSH