Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1745 ATGGACCCCACTATCGGATCTCTTCATCGCCGATCATCCTCCGATCGCCTCCTCCAACCCTTCACCATCTCCACCACCGCTTCCTCCACCGGAGATGATTTCAACGAGGCCGAGCTTTTCTGGTCCGGCGACCTTTCCGAATCGGAACATAACCGCCACGTCATCACTCCTCCCGATGATAGCAAAAATCACATCCGGAATTTCAATCGCTCGTTAAACTCCGGTATCCTCGCTGCCTTAACCGAACCCGATCACGCACCGGTGATTTGCCGGAAATCTTCCATTTCGTCATCATCTTCAAGATTGATTCCTTCGTTGCCAAGACCTACAGGTTCTTCCGATTACTTATCACAATCGGTTGGTTCTAGAAAGTTCCAGCAATCGGCGCCGGTGAAAGTTCCGATCATGAAAATTCCGAGGAGGAGGAATGGTCAGGAGCTTACTCTTATGGATGATGATGATGACGACGATAATGACGAGATGTTACCGCCGCATGAAATAGTGGCTAGAGGTTATGGAGTTTCGCCGAAGAAGACGTGTTCGGTGTTGGAAGGAGTGGGAAGAACTCTGAAAGGGAGGGATCTTCGTCAGAAAAAGAAAATGGAAAATATGGCAGCAGGTTATAGGTTCTACCCTACAGAAGAGGAACTTATTTCATTCTATCTTCACAACAAACTTGAAGGAGAGAAAGAAGATATCATGAACCGGGTTATACCACTCATTGATATATATTCCTATAATCCTTCTCAACTCCCACAAATTTCGGGAGAGGCAAGTATGAAAGACACTGAGCAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGCTAGAGGAAAGAGGCCAAAGAGGCTCACACCTAGTGGGTTCTGGAAAGCTACCGGCTCTCCTTATCACGTTTATTCGAAAGATAATCGCTTAATTGGAATGAAAAGAACCATGGTTTTCTATAGTGGAAGAGTTTCGAATGGAAGGAAAACCAATTGGAAAATGAATGAGTATAAGGCCATAGAAGCTGAAGCATCCTCTTCAAAGAAGATAGGTGATAAGAAATTAAGGCATGAATTCAGCTTATGCCGAGTGTACAAGAAATCAAAGTGGTTGAGAGCATTTGATAGACGACCATCACCAAGAAGGGACACATCAAATGTTCAAGATCAATGTCAAATGGTTTCAACATCTTATGATCAATATCATCATAACCCTATTCATGAAATGATATTGGAAACTGAGACAAGTGCAACAATGCCAATATCATATGATGAGACGAGTTCATCTTCTGAAGATCATGGCCAACCCTCCCAAGCTAGGGAATCTAGTCATATGGAGGTGGATACAAATGAGCCTTTGCTAAATTGGGAGCAAGTGGATTGGTTCTTGGGATGGGAACCATCGACATAA 1401 0.4383 MDPTIGSLHRRSSSDRLLQPFTISTTASSTGDDFNEAELFWSGDLSESEHNRHVITPPDDSKNHIRNFNRSLNSGILAALTEPDHAPVICRKSSISSSSSRLIPSLPRPTGSSDYLSQSVGSRKFQQSAPVKVPIMKIPRRRNGQELTLMDDDDDDDNDEMLPPHEIVARGYGVSPKKTCSVLEGVGRTLKGRDLRQKKKMENMAAGYRFYPTEEELISFYLHNKLEGEKEDIMNRVIPLIDIYSYNPSQLPQISGEASMKDTEQWFFFIPRQESEARGKRPKRLTPSGFWKATGSPYHVYSKDNRLIGMKRTMVFYSGRVSNGRKTNWKMNEYKAIEAEASSSKKIGDKKLRHEFSLCRVYKKSKWLRAFDRRPSPRRDTSNVQDQCQMVSTSYDQYHHNPIHEMILETETSATMPISYDETSSSSEDHGQPSQARESSHMEVDTNEPLLNWEQVDWFLGWEPST 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1745 466 MobiDBLite consensus disorder prediction 419 448 - -
Lal1g1745 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 205 459 - -
Lal1g1745 466 Gene3D NAC domain 213 369 IPR036093 GO:0003677|GO:0006355
Lal1g1745 466 Pfam Senescence regulator 33 197 IPR007608 -
Lal1g1745 466 MobiDBLite consensus disorder prediction 99 123 - -
Lal1g1745 466 SUPERFAMILY NAC domain 200 364 IPR036093 GO:0003677|GO:0006355
Lal1g1745 466 MobiDBLite consensus disorder prediction 419 440 - -
Lal1g1745 466 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 205 459 - -
Lal1g1745 466 Pfam No apical meristem (NAM) protein 206 335 IPR003441 GO:0003677|GO:0006355
Lal1g1745 466 ProSiteProfiles NAC domain profile. 204 364 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1745 Lal-Chr1 19849256 19859145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1745 202 458 NAC Transcription Factor Family AT5G22380 45.660 5.17e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal1g1745 Senescence_reg 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1745 - - lang:109348309 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1745 1 19849256 19859145 Lal1g1745 1 19849256 19859145 ECH