Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1731 ATGAATGCTTCTCATGGCATAGAAAGAATTCCAACTCCAAAACCTCAACTCAACAAAATCCAAATAACAAAGCTCTTCAAAGATGCTTATCATTCACCTCTTTTGCTTATTAAATCTCTCAGAAGACTCAAATCCATTGCTTCCGGTAGCGAAACGAATAAACGTTGCATGGAAGCTTCAGGTGCTGTTGAATTCTTAGCATCATTTATAGTAAGCAACATAGACAACAATGATTCTGCAACAAGTGCTGAAGATGAAGCTTTAAGTATCCTCCATGATCTGCATGTATCAGAAGCTGGTTTGAAGATTCTGCTAGGGTTCAAAAATGGTGAGTTTATTGAATCCTTAACAAGGGTGATGCAAAAGGGTATCTATGAGTCACGAGTTTATGCATTGTTCTTGCTGAAATCAATGTCTGAAGTGGCTGAACCAGTGCAGTTATTCCATATAAGAACCGAGTTATTCATGGAGTTAATACATGTCTTAAAAGATCATATTTCACAGAAGGTTTCAACTTCAAACACTGGTTCAACTATGTCCTTGGGGATCAAAGCTGTATCAGTAGGTGCTGTTTCAATCCTCATAGAGCTTCTTCTTGAGTGCAAAGAGAGAAAGCCTTGTGAAGTGATGCTTGTGTTGTTGGAATCTCTATGCCAATGTGCTGAGGGAAGAGCTGAACTTTTAAGGCATGGAGCTGGGTTAGCCATAGTATCCAAAAAGATTCTTAGGGTTTCTACAATGGCAAATGATAGGGCAGTGAGGATTTTATTGTCTGTTTCTAGATTCTCTGCAACTCCAAGTGTTGTTCAAGAAATGTTGAAAATAGGTGTTGTGGCAAAGCTTTGTTTCATGCTTCAAGTGGATAGTGGAAACAAGGCCAAGGAAAAAGCAAGGGAGATACTCAAACTTCATGCTAGAGTATGGAGAGATTCTCCTTGTATACCCAACAATTTGATTTCTTCATATCCAACTTATGTGTGA 981 0.3863 MNASHGIERIPTPKPQLNKIQITKLFKDAYHSPLLLIKSLRRLKSIASGSETNKRCMEASGAVEFLASFIVSNIDNNDSATSAEDEALSILHDLHVSEAGLKILLGFKNGEFIESLTRVMQKGIYESRVYALFLLKSMSEVAEPVQLFHIRTELFMELIHVLKDHISQKVSTSNTGSTMSLGIKAVSVGAVSILIELLLECKERKPCEVMLVLLESLCQCAEGRAELLRHGAGLAIVSKKILRVSTMANDRAVRILLSVSRFSATPSVVQEMLKIGVVAKLCFMLQVDSGNKAKEKAREILKLHARVWRDSPCIPNNLISSYPTYV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1731 326 Gene3D - 11 306 IPR011989 -
Lal1g1731 326 PANTHER WDSAM1 PROTEIN 2 323 IPR045185 GO:0061630
Lal1g1731 326 Coils Coil 326 326 - -
Lal1g1731 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 2 323 - -
Lal1g1731 326 SUPERFAMILY ARM repeat 30 299 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1731 Lal-Chr1 19746318 19747308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1731 1 323 U-box Gene Family AT3G52450 50.000 3.44e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1731 - - gmx:100809839 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1731 1 19746318 19747308 Lal1g1731 1 19746318 19747308 ECH
Lal11g1281 11 16481539 16482774 Lal1g1731 1 19746318 19747308 LSH
Lal1g1731 1 19746318 19747308 Lal20g0197 20 1384533 1385768 LSH
Lal1g1731 1 19746318 19747308 Lal13g1323 13 12156037 12157272 PCT
Lal13g1322 13 12124422 12125678 Lal1g1731 1 19746318 19747308 PCT