Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1717 ATGTCTCATTCTCAACAACAACAACATCCACATTGGAGAACTTATGAGAACATGGTCATGCAAGTCTATGATATGCAAGTAGCTTCAGCTTCCGCTGCGGCTTCACCACCCCGACAACTACCACCCCGACAACTACCACCCCGACAACTACCACCCCGACCACCACCACCCGTTCCAAACAAGAGAGAAACTTTTATTGCCAACCAATTTCCTATGGTAGATAATATGGCTATGCAAGTCTATGATATACCAGTGGCATTGGCTTCCATTGCGGCGCCACCACCTCAACAACCACCACCGCCTCAACAACCACCACCTCGACTACCACCACCCGTTCCACGCAGGAGAGGGACACCTTGGACTGAAGACGAACACAGATTATTTCTCATCGGCCTTAAAAAATATGGCAGAGGTGATTGGAGAAGTATCTCAAGATTTTCAGTCGTGTCAAGAACTCCATGTCAAGTTGCTAGTCATGCCCAAAAATATTTCAATCGAAAAAGTTCCAAGACAAAGAAAAGGAAAAGCATTCACGATATAACCCTAGATGAATCTGATCAGATCATTATCTCTCGTTCCATTCTTCATCACAACTTGGCTCCTCTCCCATATAACCCTATCCTTTATCTTGACCTAACATCTAATAGGTCTAGTCATTTTCCTAACCCTCACAACCCTAATCACCACAATTTATTTACTCCTTCACAATATCAAGACACAACCACAATGGGGTTAGCCCAAATGCCTCAAATCACTAGTCATGGAACTTCAATTCTTCCATTACAAAATTTTGATCCTCCAATACAAAATTTGGATATTACATTACAAAATTTGGATCTTCCATTACAACGTTTGGATATTCCACCACAGAATTGGATGTATCAAACACCTCCTGAAATGTTGCAACCACAAGAACTATGGCCCTCTCTACTACAAAACAACTTGCCTCAAAAA 954 0.4235 MSHSQQQQHPHWRTYENMVMQVYDMQVASASAAASPPRQLPPRQLPPRQLPPRPPPPVPNKRETFIANQFPMVDNMAMQVYDIPVALASIAAPPPQQPPPPQQPPPRLPPPVPRRRGTPWTEDEHRLFLIGLKKYGRGDWRSISRFSVVSRTPCQVASHAQKYFNRKSSKTKKRKSIHDITLDESDQIIISRSILHHNLAPLPYNPILYLDLTSNRSSHFPNPHNPNHHNLFTPSQYQDTTTMGLAQMPQITSHGTSILPLQNFDPPIQNLDITLQNLDLPLQRLDIPPQNWMYQTPPEMLQPQELWPSLLQNNLPQK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1717 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 167 IPR006447 GO:0003677
Lal1g1717 318 MobiDBLite consensus disorder prediction 91 116 - -
Lal1g1717 318 SUPERFAMILY Homeodomain-like 113 168 IPR009057 -
Lal1g1717 318 CDD SANT 119 164 IPR001005 -
Lal1g1717 318 Gene3D - 118 169 - -
Lal1g1717 318 PANTHER TRANSCRIPTION FACTOR KUA1 114 213 - -
Lal1g1717 318 ProSiteProfiles Myb-like domain profile. 112 164 IPR001005 -
Lal1g1717 318 MobiDBLite consensus disorder prediction 91 120 - -
Lal1g1717 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 168 IPR017930 -
Lal1g1717 318 ProSiteProfiles SANT domain profile. 115 170 IPR017884 -
Lal1g1717 318 Pfam Myb-like DNA-binding domain 119 164 IPR001005 -
Lal1g1717 318 MobiDBLite consensus disorder prediction 39 61 - -
Lal1g1717 318 MobiDBLite consensus disorder prediction 29 62 - -
Lal1g1717 318 SMART sant 116 166 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1717 Lal-Chr1 19595584 19596635 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal1g1717 Myb_DNA-binding 2.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1717 - - lang:109356171 227.254