Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1704 ATGGCTACTACATTCTGTACATACCTCATTTTTCTTCTATCATTCACCTTCACAATCTTCAATCTAAGTTCATCTTCTTCACCATCAGAATCTGATATTCTTCTCTCATTCAAAGCCTCAATCCAAGACTCTAAGAATGCTTTATCTACATGGTCCAATACTTCATCAAACCATTATTGTAACTGGTTTGGAATCTCATGCTCAACTACAAAACCAATCTCAGTAACTTCTATTAACCTTCAAAGCTTAAATCTTTCTGGTGATATCTCTTCTTCTATATGTGATTTACCAAAACTCTCTTACCTCAACCTTGCTGATAATGTTTTCAATGAACCTATTCCACTTCACCTTTCACAGTGTAGTTTCTTGGAAACTTTGAATCTAAGTAACAATCTTATATGGGGTACTATCCCTTCTCAGATTTCTCAACTTGGTTCATTGAAAGTACTTGACTTAAGTAGAAACCATATAGAAGGAAATATCCCTGAGAGTTTAGGTGCATTGAAGAACCTTCAAGTACTTAACATGGGTAGTAACTTGTTATCAAGAGATGTACCTGCTATTTTTGGAAACTTAACTAAGCTTGAAGTGCTTGATTTGTCTCAAAATCCTTACTTGGTGAGTGAGATTCCTAAGGATATTGGTGAACTTGGAAGCTTAAAGCAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAAGTTCTTTGGTGGGTTTGCATAGTTTAACTGATTTGGATCTTTCTGATAACAATCTAACAGGTGTTGTTCCAAAGAATCTAGCTTTTTCTCTTAAGAATCTAGTTTTCTTTGATGTTTCACAGAACAAGCTTTCAGGGCCATTTCCAAATGGTATTTGTAAAGGCCTTATTATAAATCTCAGCCTCCACACAAATATTTTCACAGGTTCATTACCAAACAACTCTATTAGTGAATGTATGAGTCTAGAGAGATTTCAAGTTCAGAACAATGGTTTCTCTGGTGATTTCCCTAATGAGCTTTTTTCATTACCTAAAATCAAGCTCATAAGAGCTGAAAACAATAGGTTCTCTGGTCAAATACCTGAGTCAATATCAAAAGCTGTTTTGTTGGAACAAGTTCAGCTTGACAATAACAGCTTTTCTGGTAAAATCCCTCAAGGTCTTGGCTTTGTGAAGAGCTTATACAAATTCTCAGCTTCTCTCAATCATTTATATGGTGAACTTCCTCTAAATTTCTGTGACTCACCAGTTATGAGCATAGTAAACCTCTCTCACAATTTACTTTCTGGTCAAATTCCTCAGCTGAAAAAATGCAAGAAACTAGTGTCATTGTCTTTATCTGATAATAGTATAACTGGAGAAATTCCAACTTCACTTGCTGAGTTACCAGTTTTAACTTACCTTGACCTTTCAGATAACAACCTCACTGGTTCAATCCCACAAGGGCTTCAAAACTTGAAACTTGCACTTTTCAATGTTTCATTCAATCATCTTTCTGGTGAAGTACCATACTCATTGATTTCTGGTCTACCTGCCTCATTTTTGGAGGGTAACCCTGGCCTTTGTGGTCCTGGATTACCAAACTCATGTTCTCATGATTATATGCCAAGACATCATAGTACTGGTCTTACAACATTAACATGTGCATTAATTGCTTTAGCATTTGTTGTTGGAATTGCCTTTGTTGTTGGTGGATTTATGTTGTATAAGAGATCCTGCAAGGTGAATGATAATGAAGTAGGTGTTTTTCGCTCGGTGTTCTTTTATCCTCTAAGAATCACTCAGAATGATTTGCTTATAGGGATGAATGAGAAAAGCTTATTAGGGAAGGGTGGAGTTTTTGGCAAAGTTTATGCAGTTAGTTTGCCTAGTGGTGAACTTGTAGCTGTGAAGAAGGTTGTTAATTTCGGAAACCGATCTTCGAAGAGTTTGAAAGCTGAGGTGAAGACTATGGCAAAGATTAGGCATAAAAACATTGTCAAAATTCTGGGATTTTGCCACTCAAATGAGTCAGTTTTTCTCATTTATGAGTACTTGAATGGAAAAAGCTTAGGGGATTTGATTTCAAGTCAGAATTTTGAGCTTCAATGGGGATTTAGATTGAGAATTGCTATTGGAGTTGCTCAAGGACTTGTTTATCTTCACAAGGATTATGAACCACACTTGATTCATAGAAATGTTAAGTCAAATAATATTCTGTTGGATGAAAATTTTGAGCCAAAACTTACTGATTTTGCTCTTGATAGAGTTTTAGGAGAAGCTGCTTTTAAGTCAAGTTTGGATTCTGAAGGAGAATCTTCATGTTATAATGCACCAGAATATGGTTACAATAAGAAACCAAGTGAACAATTAGATGTGTATAGTTTTGGTGTTGTATTGTTAGAGCTAGTGAGTGGAAAACAAGCATACCCAAAAGAGGAAAATGATGAATCTCTTGACATAGTAAAATGGGTTAGAAGAAAAGTGAACATTACTAATGGGGTGCAACAAATTCTTGATCCAAGAATATCACATACTTTTCACCATGAAATGATTGAAGCTTTGAATATAGCTCTTAGTTGCATTTCTGTGGTGCCTCAAAAAAGACCATCAATGGTAGATGTTGTTAGAGATCTTCAGTCCCTTGAATCAAGAACTTGCATTGCAAATTTGAAGGATACAAGTGAGGAACAATCCATTTCTATGTGA 2673 0.3562 MATTFCTYLIFLLSFTFTIFNLSSSSSPSESDILLSFKASIQDSKNALSTWSNTSSNHYCNWFGISCSTTKPISVTSINLQSLNLSGDISSSICDLPKLSYLNLADNVFNEPIPLHLSQCSFLETLNLSNNLIWGTIPSQISQLGSLKVLDLSRNHIEGNIPESLGALKNLQVLNMGSNLLSRDVPAIFGNLTKLEVLDLSQNPYLVSEIPKDIGELGSLKQLLLQSSSFQGEIPSSLVGLHSLTDLDLSDNNLTGVVPKNLAFSLKNLVFFDVSQNKLSGPFPNGICKGLIINLSLHTNIFTGSLPNNSISECMSLERFQVQNNGFSGDFPNELFSLPKIKLIRAENNRFSGQIPESISKAVLLEQVQLDNNSFSGKIPQGLGFVKSLYKFSASLNHLYGELPLNFCDSPVMSIVNLSHNLLSGQIPQLKKCKKLVSLSLSDNSITGEIPTSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNHLSGEVPYSLISGLPASFLEGNPGLCGPGLPNSCSHDYMPRHHSTGLTTLTCALIALAFVVGIAFVVGGFMLYKRSCKVNDNEVGVFRSVFFYPLRITQNDLLIGMNEKSLLGKGGVFGKVYAVSLPSGELVAVKKVVNFGNRSSKSLKAEVKTMAKIRHKNIVKILGFCHSNESVFLIYEYLNGKSLGDLISSQNFELQWGFRLRIAIGVAQGLVYLHKDYEPHLIHRNVKSNNILLDENFEPKLTDFALDRVLGEAAFKSSLDSEGESSCYNAPEYGYNKKPSEQLDVYSFGVVLLELVSGKQAYPKEENDESLDIVKWVRRKVNITNGVQQILDPRISHTFHHEMIEALNIALSCISVVPQKRPSMVDVVRDLQSLESRTCIANLKDTSEEQSISM 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1704 890 Gene3D Ribonuclease Inhibitor 291 533 IPR032675 -
Lal1g1704 890 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Lal1g1704 890 Pfam Leucine Rich repeat 242 256 IPR001611 GO:0005515
Lal1g1704 890 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Lal1g1704 890 Pfam Leucine rich repeat 435 493 IPR001611 GO:0005515
Lal1g1704 890 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Lal1g1704 890 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Lal1g1704 890 SUPERFAMILY Protein kinase-like (PK-like) 600 867 IPR011009 -
Lal1g1704 890 PANTHER OSJNBB0022F23.6 PROTEIN 9 878 - -
Lal1g1704 890 Pfam Protein kinase domain 599 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1704 890 Gene3D Phosphorylase Kinase; domain 1 590 673 - -
Lal1g1704 890 CDD STKc_IRAK 603 870 - -
Lal1g1704 890 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 878 - -
Lal1g1704 890 PRINTS Leucine-rich repeat signature 244 257 - -
Lal1g1704 890 PRINTS Leucine-rich repeat signature 457 470 - -
Lal1g1704 890 ProSiteProfiles Leucine-rich repeat profile. 459 482 IPR001611 GO:0005515
Lal1g1704 890 Gene3D Ribonuclease Inhibitor 186 290 IPR032675 -
Lal1g1704 890 Gene3D Transferase(Phosphotransferase) domain 1 674 888 - -
Lal1g1704 890 SUPERFAMILY L domain-like 292 521 - -
Lal1g1704 890 SUPERFAMILY L domain-like 26 288 - -
Lal1g1704 890 ProSiteProfiles Protein kinase domain profile. 597 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1704 890 SMART LRR_typ_2 96 120 IPR003591 -
Lal1g1704 890 SMART LRR_typ_2 241 266 IPR003591 -
Lal1g1704 890 SMART LRR_typ_2 457 480 IPR003591 -
Lal1g1704 890 SMART LRR_typ_2 144 167 IPR003591 -
Lal1g1704 890 SMART LRR_typ_2 168 191 IPR003591 -
Lal1g1704 890 SMART LRR_typ_2 192 217 IPR003591 -
Lal1g1704 890 SMART LRR_sd22_2 433 459 - -
Lal1g1704 890 SMART LRR_sd22_2 241 262 - -
Lal1g1704 890 SMART LRR_sd22_2 266 297 - -
Lal1g1704 890 SMART LRR_sd22_2 192 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1704 Lal-Chr1 19491633 19495536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1704 34 870 Receptor kinase-like Gene Family AT5G06940 62.069 0.0 995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal1g1704 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1704 - - gmx:100794428 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1704 1 19491633 19495536 Lal1g1704 1 19491633 19495536 ECH
Lal11g1312 11 16765690 16769105 Lal1g1704 1 19491633 19495536 LSH