Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1695 ATGGGTAATTGTTGTGCAACACCACAAGGGGAAACGAAGAAGAAGAAAGAAAAGGAGAACCCTTTCGCTAACAATTATGGAAACGGTGCCGTTTCTTCAACAAGTTCAAAACTCACCGTTTTGAGCAACCCAACGGGCCAAGAGATCGAGCTTCGTTACGAGCTGGGTCGGGAACTTGGTCGTGGTGAATTTGGTGTAACGTATCTATGTACGGACAAAGATTCAGGTGAAGAGTTAGCGTGCAAATCGATTTCAAAGAAGAAGCTAAGAACAGCTATTGATATTGAAGATGTGAGGAGAGAGGTTGAGATTATGAGGCACTTGCCTAAACATCCTAACATTGTTACTTTGAAGGATACTTATGAGGATGATAATGCTGTTCACCTTGTTATGGAGCTTTGTGAGGGTGGCGAGCTTTTCGATCGGATCGTGGCTCGCGGCCACTATACTGAACGTGCTGCTGCTGCTGTAACCAAGACTATTGTTGAAGTTGTGCAGATGTGCCACAAACATGGTGTAATGCATCGGGATCTCAAACCTGAGAATTTTTTGTTTGCAAATAAGAAGGAAACGGCAGCTCTGAAGGCTATTGATTTTGGATTATCGGTGTTCTTTAAACCAGGAGAAAGATTTAACGAGATAGTTGGAAGTCCATATTACATGGCTCCAGAGGTATTAAAGCGAAACTATGGCCCAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTATACATCTTACTCTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATTATACGATCTGTTGTTGATTTTAAAAGGGACCCTTGGCCAAAAGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTTAATCCCGATCCAAAGCGGCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGATACAAAATGCAAAGAAAGCTCCAAACGTTTCATTAGGAGAAACTGTTAAAGCAAGGCTCAAGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCTGAGCATTTGTCAGTTGAAGAAGCTGCTGGAATAAGAGAAGGATTCCAGGTCATGGATACAGCCAACAGAGGCAAGATTAATCGTGATGAACTACGAGTAGGGTTACATAAGTTAGGTCATCAAGTTCCCGATGAAGATATCCAGATTCTTATGGATGCTGGTGATGTAGATAAGGATGGATACCTAGATTACGGAGAGTTTGTAGCCATTTCTGTTCATCTGAGAAAGATGGGTAATGACGAGCACCTTCACAAAGCTTTCCAATATTTTGATGGGAACCAAAGTGGTTATATTGAAATTGAGGAGTTGCGTCAAGCCTTATCTGATGAGGTTGAGATAAACAGCGAAGAAGTCGTTAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAAAATAAGTTTTGAGGAATTTGCTGCAATGATGAAAGCTGGCACAGATTGGAGAAAAGCTTCAAGGCAGTATTCAAGAGAAAGGTTTAACAATCTCAGCCTGAAATTGTTCAAGGATGGTTCATTGCAGTTAAACAATGATGAAAACCAATGA 1593 0.4143 MGNCCATPQGETKKKKEKENPFANNYGNGAVSSTSSKLTVLSNPTGQEIELRYELGRELGRGEFGVTYLCTDKDSGEELACKSISKKKLRTAIDIEDVRREVEIMRHLPKHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKRRLTAQEVLDHPWIQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEAAGIREGFQVMDTANRGKINRDELRVGLHKLGHQVPDEDIQILMDAGDVDKDGYLDYGEFVAISVHLRKMGNDEHLHKAFQYFDGNQSGYIEIEELRQALSDEVEINSEEVVNAIMHDVDTDKDGKISFEEFAAMMKAGTDWRKASRQYSRERFNNLSLKLFKDGSLQLNNDENQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1695 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 508 - -
Lal1g1695 530 MobiDBLite consensus disorder prediction 1 37 - -
Lal1g1695 530 SUPERFAMILY EF-hand 335 504 IPR011992 -
Lal1g1695 530 Gene3D - 320 495 - -
Lal1g1695 530 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Lal1g1695 530 Gene3D Phosphorylase Kinase; domain 1 55 138 - -
Lal1g1695 530 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Lal1g1695 530 CDD EFh 430 492 IPR002048 GO:0005509
Lal1g1695 530 Pfam EF-hand domain pair 371 420 IPR002048 GO:0005509
Lal1g1695 530 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Lal1g1695 530 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Lal1g1695 530 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Lal1g1695 530 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1695 530 SMART efh_1 466 494 IPR002048 GO:0005509
Lal1g1695 530 SMART efh_1 430 458 IPR002048 GO:0005509
Lal1g1695 530 SMART efh_1 394 422 IPR002048 GO:0005509
Lal1g1695 530 SMART efh_1 358 386 IPR002048 GO:0005509
Lal1g1695 530 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Lal1g1695 530 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Lal1g1695 530 CDD STKc_CAMK 52 310 - -
Lal1g1695 530 Pfam EF-hand domain pair 429 492 IPR002048 GO:0005509
Lal1g1695 530 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Lal1g1695 530 SUPERFAMILY Protein kinase-like (PK-like) 52 319 IPR011009 -
Lal1g1695 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lal1g1695 530 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1695 530 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 9 508 - -
Lal1g1695 530 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Lal1g1695 530 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1695 Lal-Chr1 19383361 19388620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1695 1 527 EF-hand Containing Proteins AT5G19450 79.323 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal1g1695 Pkinase 2.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1695 K13412 - gmx:100808399 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1695 1 19383361 19388620 Lal1g1695 1 19383361 19388620 ECH
Lal11g1332 11 16926597 16930720 Lal1g1695 1 19383361 19388620 LSH
Lal1g1695 1 19383361 19388620 Lal20g0254 20 1824480 1828761 LSH
Lal1g1695 1 19383361 19388620 Lal13g1519 13 14917876 14924831 PCT
Lal13g1519 13 14917876 14924831 Lal1g1695 1 19383361 19388620 PCT