Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1689 ATGAAGAGTCTCCTCAAGGATTTCGAATTAGACTCTAAAAATCCCTCCGTTGAAGCTCTCACGCGGTGGAGAACCGCCGTCAGCTTCGTCGTCAAGAACCGCCGCCGCCGGTTCCGTATGGTCGCCGATCTTGACAAACGTTCTGAAGCAGAACAGATTAAGCTCGGAATACAGGAAAAAATTCGGATTGCTCTATATGTTCAAAAGGCAGCATTGCAATTCATTGATGCCTGTAGTCGAGTTGAATACAAGCTACCAGAAGAGGCGAGAGCAGCTGGTTTCGGAATTCATCCAGATGAGATTGCTTCGATCGTTCGCGCTCATGAGTCTAAGATCTTGAGTAACATTGGTGGAGTTGAAGCTGTCACGAGGAAACTCTCAGTCTCGGTGGATGAGGGTGTCAATGAAGAGAGTATAAATAGCAGACAACAGATTTATGGGGTCAACCGTTATACGGAGAAACCTTCGAGATCGTTCCTGATGTTTGTGTGGGATGCACTGCAGGACTTAACTCTAATCATTCTTATGGTGTGTGCTATAGTTTCTATTGGTGTAGGGATTTCAACTGAAGGGTGGCCAAGGGGAACTTATGATGGTGTAGGAATCATACTAAGTATATTCTTAGTAGTCATTGCTACTGCTATTAGTGACTACAAGCAATCCCTGCAGTTCCAGGAATTGGACAAAGAGAAGAAAAAGATATTTGTTCAGGTCACCAGGGGTGGGAAAAGACAGAAGATCTCGATTTATGATATCGTAGTTGGCGATATTGTTCATTTATCAACTGGTGATCAAGTTCCTGCTGATGGGATTTATATATCAGGATATTCTTTGCTTATCGATGAATCCAGTTTGTCGGGTGAGAGCGAACCTGCAAATGTAAATGGAGAGAAACCCTTTCTTCTCTCAGGAACTAAAGTGCAGGATGGTCTCGGGAAGATGTTAGTTACAACTGTTGGCATGAAGACTGAATGGGGAAAATTGATGGAAACGCTTAGCGAGGGAGGAGAGGATGAGACCCCATTGCAGGTGAAACTGAACGGGGTTGCTACAATTATCGGTAAAATCGGTTTGGCATTTGCAGTTGTGACATTTTTAGTGTTGACAATAAGGTTTTTGGTCGAAAAAGGGCTTCACGGTGAGATTTCGAGTTGGTCTTCGAATGACGCAATGAAGCTCCTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCAGTTCCTGAAGGATTACCATTGGCTGTGACACTAAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAGGGCACTTGTGAGGCATCTTTCAGCTTGTGAGACTATGGGTTCAGCTAGTTGCATATGCACAGATAAGACTGGGACATTGACCACTAATCATATGGTAGTTAATAAAGTGTGGATATGTGAAGATGTCACACAGATAAAATGTAATGAAAGTGCAGATGAATTGAAAACAAAGATATCTGAAAATGTATTAACCACCCTTTTACAGGCCATATTCCAAAATACTTCATCTGAAGTAGTTAAAGATAAAGATGGAAAGAACACAACATTAGGAACCCCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTTTGGGTGCCGATTTTGATGCCCAGCGTGGAGCGGGTAAGATAATCAAGATTGAGCCTTTCAATTCAGTCAGGAAGAAGATGTCTGTGCTTGTACGTCTTCCTGATGGAGGGGTCCAAGCTTTCTGCAAAGGTGCATCCGAAATAATATTAAAAATGTGTGACAAAATTATTGATTCCAATGGTATAGTTGTTGATCTTCACGAGAGCCGTGTGAATGAAGTCTTGGATGTTATAAATAGCTTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTGGCTGTAAAAGATCTTAGTGAAATCCATGAGGAAAGCAACATCCCTGATGATGGCTATACTCTGATAGCCATAATAGGAATCAAGGATCCTTTACGCCCTGGGGTTAAGGAAGCCGTTCAAACTTGTTTAGCAGCGGGAATAACCGTCCGCATGGTCACTGGTGACAACATAAATACAGCTATAGCTATAGCTAAAGAATGTGGTATACTTACTGAGGGTGGTGTAGCCATAGAAGGACCAGATTTTCGAGACTTGTCTCCAGAGCAAATGAAGGATATCATACCAAGAATTCAGGTGATGGCACGATCCTTACCGCTTGACAAGCATAAATTAGTAACCAATTTGAGGAATATGTTTGGTGAGGTTGTTGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAAGCAGACATCGGACTCGCCATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAATGCTGACGTTATCATATTAGATGATAACTTCGCTACTATTCTTAACGTAGCCAAATGGGGACGTGCAGTATACATAAACATTCAAAAATTCGTGCAGTTTCAGTTAACAGTTAATGTCGTTGCTCTGATTACCAACTTTGTTTCTGCATGCATTACTGGATCTGCTCCACTCACTGCTGTTCAGCTGCTTTGGGTGAACTTGATTATGGACACTCTTGGTGCATTGGCCTTGGCTACTGAACCTCCTAATGATGGACTTATGCAAAGACCCCCAGTTGGAAGGGGAGCAAGTTTTATCACCAAACCCATGTGGAGGAATATCATTGGTCAAAGTATATATCAGTTAATTGTCCTCGGACTTCTAAACTTTAACGGGAAGCGGCTGCTCGAAATTACTGGTTCAGATGCAACTATAGTTCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTTAATGAGATAAATAGCAGAGATATTGAAAAAATAAACATATTCAAAGGAATATTTGACAGTTGGATGTTTCTGATCATAATTTCGGCCACGGTAGCGTTTCAAGTGATCATAGTCGAGTTCCTGGGAACTTTTGCGAGCACGGTTCCTCTAAATTGGCAATTCTGGTTACTCAGTGTCTTAATTGGAGCAGTTAGCATACCTATAGCTGCTATCTTCAAGTGCATCCCAGTTGAAAAAGATACTACCACTAAGCACCATGATGGTTATGAGGCACTGCCTTCTGGTCCTGAGTTTGTATAA 3105 0.419 MKSLLKDFELDSKNPSVEALTRWRTAVSFVVKNRRRRFRMVADLDKRSEAEQIKLGIQEKIRIALYVQKAALQFIDACSRVEYKLPEEARAAGFGIHPDEIASIVRAHESKILSNIGGVEAVTRKLSVSVDEGVNEESINSRQQIYGVNRYTEKPSRSFLMFVWDALQDLTLIILMVCAIVSIGVGISTEGWPRGTYDGVGIILSIFLVVIATAISDYKQSLQFQELDKEKKKIFVQVTRGGKRQKISIYDIVVGDIVHLSTGDQVPADGIYISGYSLLIDESSLSGESEPANVNGEKPFLLSGTKVQDGLGKMLVTTVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATIIGKIGLAFAVVTFLVLTIRFLVEKGLHGEISSWSSNDAMKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDRALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKVWICEDVTQIKCNESADELKTKISENVLTTLLQAIFQNTSSEVVKDKDGKNTTLGTPTESALLEFGLLLGADFDAQRGAGKIIKIEPFNSVRKKMSVLVRLPDGGVQAFCKGASEIILKMCDKIIDSNGIVVDLHESRVNEVLDVINSFASEALRTLCLAVKDLSEIHEESNIPDDGYTLIAIIGIKDPLRPGVKEAVQTCLAAGITVRMVTGDNINTAIAIAKECGILTEGGVAIEGPDFRDLSPEQMKDIIPRIQVMARSLPLDKHKLVTNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIILDDNFATILNVAKWGRAVYINIQKFVQFQLTVNVVALITNFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMQRPPVGRGASFITKPMWRNIIGQSIYQLIVLGLLNFNGKRLLEITGSDATIVLNTLIFNSFVFCQVFNEINSRDIEKINIFKGIFDSWMFLIIISATVAFQVIIVEFLGTFASTVPLNWQFWLLSVLIGAVSIPIAAIFKCIPVEKDTTTKHHDGYEALPSGPEFV 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1689 1034 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Lal1g1689 1034 Pfam haloacid dehalogenase-like hydrolase 448 765 - -
Lal1g1689 1034 Gene3D - 460 655 IPR023299 GO:0000166
Lal1g1689 1034 SUPERFAMILY HAD-like 449 856 IPR036412 -
Lal1g1689 1034 CDD P-type_ATPase_Ca_PMCA-like 139 884 - -
Lal1g1689 1034 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1689 1034 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1689 1034 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1689 1034 SFLD C1.7: P-type atpase like 432 803 - -
Lal1g1689 1034 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Lal1g1689 1034 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Lal1g1689 1034 SFLD p-type atpase 432 803 IPR044492 -
Lal1g1689 1034 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Lal1g1689 1034 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1012 IPR023298 -
Lal1g1689 1034 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Lal1g1689 1034 PANTHER CATION TRANSPORTING ATPASE 46 1018 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Lal1g1689 1034 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Lal1g1689 1034 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 716 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1689 1034 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 388 516 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1689 1034 Gene3D - 15 77 - -
Lal1g1689 1034 PANTHER CALCIUM-TRANSPORTING ATPASE 46 1018 - -
Lal1g1689 1034 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Lal1g1689 1034 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 109 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lal1g1689 1034 Pfam E1-E2 ATPase 235 428 - -
Lal1g1689 1034 Gene3D - 165 1010 - -
Lal1g1689 1034 Gene3D - 447 796 IPR023214 -
Lal1g1689 1034 Gene3D - 133 333 - -
Lal1g1689 1034 SMART Cation_ATPase_N_a_2 115 187 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1689 Lal-Chr1 19310984 19320254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1689 57 1031 Primary Pumps ATPases AT3G57330 73.846 0.0 1493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1689 K01537 - gmx:100783489 1712.97