Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1670 ATGGGTATGGCTGCATCAGAGTCACAACAGTATCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTTCTAAAAACTTCTTCTTATCAAGTTACTACAGTTGATTCTGGTAGCAAAGCTTTAGAGTTTCTTGGCTTACATGAGAATGATGAGAGTAATCCAAATACACTATGTGTTTCTTCAAAAATCAATCATGAAGTGGAAGTGAATCTAGTTATAACAGATTACTGTATGCCTGGCATGACAGGTTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTAGTGATTATGTCATCTGAAAATGTACCTTCAAGGATTACCAGATGTTTGGAGGAAGGAGCTGAGGAATTTTTCTTGAAGCCTGTAAGGAAATCAGATTTGAATAGGCTTGAACCTCATATTAAAAGGACCAAACTCAAAGATCAAAACCTTGAAACACAAGAAAAGGTTGAAAATTCAGAAATTCTTCATCAACAACAACAACAACAATCAGAGACTAATATAGAACAACAACAACAACAATCAGAGACAAATATAGAACAACAACAACAATTACTACAACAAGGTAACAATAACAAGAGGAAGAGTGTTGAACAAGGGATTTCACCTGAGTCTGATAGAACAAGACCAAGATACAATAATGGCATAGCCACTTTGGTATGA 702 0.3547 MGMAASESQQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENDESNPNTLCVSSKINHEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRKSDLNRLEPHIKRTKLKDQNLETQEKVENSEILHQQQQQQSETNIEQQQQQSETNIEQQQQLLQQGNNNKRKSVEQGISPESDRTRPRYNNGIATLV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1670 233 SUPERFAMILY CheY-like 10 187 IPR011006 -
Lal1g1670 233 SMART REC_2 11 144 IPR001789 GO:0000160
Lal1g1670 233 ProSiteProfiles Response regulatory domain profile. 12 148 IPR001789 GO:0000160
Lal1g1670 233 MobiDBLite consensus disorder prediction 151 233 - -
Lal1g1670 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 226 IPR045279 GO:0009736
Lal1g1670 233 Gene3D - 10 221 - -
Lal1g1670 233 MobiDBLite consensus disorder prediction 166 211 - -
Lal1g1670 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 226 - -
Lal1g1670 233 MobiDBLite consensus disorder prediction 151 165 - -
Lal1g1670 233 CDD REC_typeA_ARR 13 143 - -
Lal1g1670 233 Pfam Response regulator receiver domain 13 140 IPR001789 GO:0000160
Lal1g1670 233 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1670 Lal-Chr1 19138744 19140882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1670 1 233 Response Regulator Gene Family AT3G57040 63.223 3.48e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal1g1670 Response_reg 5.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1670 K14492 - gmx:100788079 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1381 11 17331829 17333925 Lal1g1670 1 19138744 19140882 LSH