Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1662 ATGGAAGAAACGTGGTTGTGTTCATTGTGTGAAAAAAGAGCTAGGATTGTGTGTGAGTCAGACCAGGCTAAGCTATGCTGGAACTGTGACCACAAAGTACACAGTGCTAACTTCCTTGTGGCTAAGCACTTAAGGATCCTTCTTTGCAATTTATGTCAATCTCTTACTCCATGGAATGCTTGTGGGCCCTCCTTAACTCCGACTTCATCTCTTTGCCACCCTTGCTCCCTTTTTCGGGATAATATTCGGGGCGATGATAATGATGACGATGATGATAATAATGATACCGAGTCGGAAGAGTACGAGAGTTATGATGGTGTAGAAGAGGAAGAGGAAGACGAGGGAGAGAACCAAGTAGTGCCATGGTCTTCTCCTACTCATAGTAGTGATGCTGACACTGATATATCTACCGCTGCCACTGGTTTACCGTTCAACCGTTTTCCTCATAACTTCTCTGTTCATGATTCTGATGATGAGATAGGGTGTTCCTCACAGAAACTTTGTTTAGGCCATTGA 516 0.4399 MEETWLCSLCEKRARIVCESDQAKLCWNCDHKVHSANFLVAKHLRILLCNLCQSLTPWNACGPSLTPTSSLCHPCSLFRDNIRGDDNDDDDDNNDTESEEYESYDGVEEEEEDEGENQVVPWSSPTHSSDADTDISTAATGLPFNRFPHNFSVHDSDDEIGCSSQKLCLGH 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1662 171 PANTHER OS08G0178800 PROTEIN 7 130 - -
Lal1g1662 171 ProSiteProfiles Zinc finger B-box type profile. 2 48 IPR000315 GO:0008270
Lal1g1662 171 CDD Bbox1_BBX-like 6 48 - -
Lal1g1662 171 MobiDBLite consensus disorder prediction 80 140 - -
Lal1g1662 171 MobiDBLite consensus disorder prediction 85 117 - -
Lal1g1662 171 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 130 - -
Lal1g1662 171 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Lal1g1662 171 SMART bboxneu5 2 48 IPR000315 GO:0008270
Lal1g1662 171 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1662 Lal-Chr1 19022924 19025162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1662 7 166 C2C2-CO-like Transcription Factor Family AT4G27310 37.624 1.70e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal1g1662 zf-B_box 5.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1662 - - lang:109357038 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1662 1 19022924 19025162 Lal1g1662 1 19022924 19025162 ECH