Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1655 ATGGCTACTCCTAACACCATTTTTCACCAATCCAACTCACATTCTTCTTCACTCACCTACTACTACACCACCACCGACGACGACAACGTTATTGACAGCGACATGGACGAGAATGAACAAAATGACAAAAACTCCAACATACAAAACTCCAACACCAACACCATTGCTCTACGGTGGTGCTTCCCCGTCGCAACAACCACCGTGAGAAAGTTTCTATCTGACCCAAAATGGGTAGAAGAATGGAACAGGGTTTTCCTTCTGGTTTGTGCTGCAGGGTTATTCGTGGACCCATTATTCTTCTACGCTCTCTCAATAAGTGAAACGCGTATGTGTCTTTTCGTTGATGGGTGGTTCGCCGTCACGGTCACGGTGTTGAAGTGCATGACGGACACGTTGCACCTTTGGAACATGTGGTTGCAGATAAAGATGAAGAAACAACGATGGTTTAGTTTGGTTGGAAATGGTGAAAGTGGTAGTTACAGTTATAGACATGGCAATGTTGCTGTGAGTTATCTCAAGAAAGGGTTCTTCTTTGACCTATTTGTCATCATTCCTTTGCCCCAGATTGTGCTATGGGTTGTGATCCCTTCTTTGTTGAAGAAAGGATCAATTACATTGGTGATGACAGTGTTCTTAATTATGTTCCTCTTTCAATACCTTCCCAAAATTTATCACTCAATATGTGTAATGCGTCGCATGCAAAATCTCACTGGTTACATTTTTGGAACCATTTGGTGGGGTTTTGCCCTCAACATGATTGCATATTTTGTTGCTTCACATGCTGCAGGGGCATGTTGGTACTTGCTAGGAATCCAAAGAGCAGTTGAGTGTCTTGAAGAGCAGTGTGGGAAAACCAGTGATTGTGGGCTTCAAACACTGTCTTGTAAACAACCAATATACTATGGAACCACTACTATGGTGAAAGACAAAACAAGGTTGATGTGGGCTAAGAATAGAGAAGCAAGGTCTACATGCTTAGATAACCCTAACAACTATGACTATGGTTTTTATGAATGGGTTGTTCAACTTGTAACAAATGATAGCAGAATGGAAAAGATTCTTTTCCCTATCTTCTGGGGTCTAATGACTCTCAGCACTTTTGGGAACCTACAAAGCACAACGGAATGGCTAGAAGTGGTTTTCAACATTATTGTATTGATTAGTGGGCTTCTTCTAGTCACCATGTTGATTGGAAACATAAAGGTGTTTTTGAATGCTACAACATCAAAGAAGCAAAAAATGAAGTCTAGGATGAGGAACATAGAATGGTGGATGAGGAAAAGGCATTTGCCACAAGGGTTCAGGCAACGTGTGCATAACTATGAGTGGCAACGTTGGGCTGCAATGCGTGGTGTTGATGAATCCCAATTGATACAAGATCTCCCTGAAGGCTTAAGAAGGGATATCAAATACCATCTTTGTTTAGATTTGGTGAAACAGGTGCCCTTATTTCAGCATATGGATGATCTAGTCCTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACAATATCAAGAGAAGGAGACCCAGTTCAAAGAATGGTATTTGTAGTAAGGGGTCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGAGTGAAAAGTTGCTGCATGTTAGGGCCTGGTAACTTCAGTGGTGATGAACTTCTCTCATGGTGTTTGAGAAAACCATTTTTAGAAAAACTTCCACCATCTTCATCAACTTTGATCACACTTGAAACCACAGAAGCATTTGGTCTTGAAGCAAATGATGTAAAATATGTAACACAACATTTTAGGTACATTTTTATGAAGGAAAAGGTTAAAAGAAGTGCAAGATATTACTCACCTGGATGGAGAACTTGGGCTTCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAAGCATCGTTTGACTTTGACTTCTTTGTCCTTTATAAGGGTTCGTAGACCTATCTCAATAAGTTCTTCAATAGAAGAAGATAAACTTCGTCTTTATACTGCTTTGTTAACCTCAGCAAAACCTAATCAAGATGATTTTGAGCTATGTCATTGA 2049 0.4056 MATPNTIFHQSNSHSSSLTYYYTTTDDDNVIDSDMDENEQNDKNSNIQNSNTNTIALRWCFPVATTTVRKFLSDPKWVEEWNRVFLLVCAAGLFVDPLFFYALSISETRMCLFVDGWFAVTVTVLKCMTDTLHLWNMWLQIKMKKQRWFSLVGNGESGSYSYRHGNVAVSYLKKGFFFDLFVIIPLPQIVLWVVIPSLLKKGSITLVMTVFLIMFLFQYLPKIYHSICVMRRMQNLTGYIFGTIWWGFALNMIAYFVASHAAGACWYLLGIQRAVECLEEQCGKTSDCGLQTLSCKQPIYYGTTTMVKDKTRLMWAKNREARSTCLDNPNNYDYGFYEWVVQLVTNDSRMEKILFPIFWGLMTLSTFGNLQSTTEWLEVVFNIIVLISGLLLVTMLIGNIKVFLNATTSKKQKMKSRMRNIEWWMRKRHLPQGFRQRVHNYEWQRWAAMRGVDESQLIQDLPEGLRRDIKYHLCLDLVKQVPLFQHMDDLVLENICDRVKSLVFTKGETISREGDPVQRMVFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRKPFLEKLPPSSSTLITLETTEAFGLEANDVKYVTQHFRYIFMKEKVKRSARYYSPGWRTWASVAIQLAWRRYKHRLTLTSLSFIRVRRPISISSSIEEDKLRLYTALLTSAKPNQDDFELCH 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1655 682 ProSiteProfiles cAMP/cGMP binding motif profile. 483 586 IPR000595 -
Lal1g1655 682 SMART cnmp_10 483 612 IPR000595 -
Lal1g1655 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 677 - -
Lal1g1655 682 SUPERFAMILY cAMP-binding domain-like 409 603 IPR018490 -
Lal1g1655 682 Gene3D Helix hairpin bin 408 474 - -
Lal1g1655 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 677 - -
Lal1g1655 682 SUPERFAMILY Voltage-gated potassium channels 80 404 - -
Lal1g1655 682 CDD CAP_ED 483 603 IPR000595 -
Lal1g1655 682 Gene3D Jelly Rolls 481 599 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1655 Lal-Chr1 18964428 18973707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1655 74 679 Ion Channels AT5G54250 75.693 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1655 K05391 - zju:107430493 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1655 1 18964428 18973707 Lal1g1655 1 18964428 18973707 ECH
Lal20g0297 20 2262554 2267901 Lal1g1655 1 18964428 18973707 LSH