Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1652 ATGGTGGTGATGATGATGGTGATGAAACTTGTAAAGTTGGTTTTTTCTGTTTTGTTTGTTTTTCTGTTTTTGGTTAATGCATCATTTGCTTTGTACATTCCCCCTGATAATTATTTGATTTCTTGTGGTTCCTCACAAAACATCACCTTTCAAGGCCATACTTTTATTCCTGACTCACAATATTCTTCACTAATGTCCAAAACTGGGGATTCTATAGTTGCTATTTCCAATTCTAGTGTTGTTGTTCCATTTCCAATTTATCAATCAGCTAGGATTTTCACACAAAAAGCTTCATATACATTTGAAATTGTGCAAGAAGGGAGGCACTGGGTTAGGCTATATTTTTATCCTGTTCCAAATTCTGATCATGATTTGACTTCTGCTGCTATAACTGTTGTTGCTGATGAATTTGTTCTCTTGAGCAACTTTACCTTCAGGAACTATAATGGTTCATATATGTTTAAGGAATATGCTATCAATGTTACCTCTGTCACCTTGACTGTTACCTTTATTCCTTCGAATGATTCGGTAACATTTGTCAATGCAATTGAAGTTGTGTCAATGCCAGATGAGTTGTTTATTGATCAGGCATTGGCCCTTAACCCACCAGCTCCATTTAGTGGCCTTTCTGAACTTGCTTTTGAAACCGTTTACCGGTTAAACATCGGCGGTCCCTTGCTTAATGCCCAAAATGACACCCTAGGAAGAACTTGGGAGAGTGATCTGAAATACCTTCATATGAAAAGCTCAGTCACTATTGTGTCAGTCAGTCCTTCCACCATTAAGTATCCTGCAGGTGTTACACCCGAGACAGCGCCGAATCGGGTCTATGCCACTGCTGATGCAATGGGGAATGCAAACGTAGCCGATTCTAATTTCAATATTACTTGGGTTTTTCCGGTGGATCCGAACTTCTCGTATTTTATTCGGGTGCACTTTTGTGATATTATAAGCATGTCACTCAACACTTTATTGTTCAATTTATTCATAAATACTGACATAGCTCTTGGAAACCTTGACCTGTCGTCGCTAACTAATGAATTGGCTGTGCCTTACTATAAGGACTTTGTTTCCAATGTCTCGGCCGGCTCCGAGACTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGACATCACAAATGCTACTATGAATGGATTGGAGATAATGAAGATCAGCAATGGATTGAAGAGCTTTGATGGATTTTCTTCAGTTGGAAGTCTCCTTCCTAATTCACCATCAAACAAGAAAAAGATGGGAATAGTAGTTGGTTCTGTTGGGGCTGTAGCTGCCATAGTATTGTTTGGTTTGTGTTATTGCTGTTTCGTCGGACGCAATTCGAAGTCTACTGAACACGGCCGTCCATTGTTGTCTTTACCCTCCTTATATGGAAACTTTCAGACCATGTCAATGATGTCTACAACTTCACATAAGAGTGCAACTGCAAGCTGCATTTCTTTATCTTCAATAAATCTTGGAAGGATCTTCACTTTCCATGAAATACAAGATGCATGCAACAAATTTGACGAGAAGTTGCTTCTCGGTGTGGGTGGTTTTGGCAGAGTATATAAGGGAACACTTGATGATGGGACTAATGTAGCAGTTAAAAGGGGGAATGCAAGCTCTGAACAAGGTATTGCTGAATTCAGAACAGAAATTGAAATGTTATCCAAGCTTCGCCACCGTCATCTCGTGTCTCTAATCGGTTATTGCGATGAGAGGTCAGAAATGATTCTTGTCTATGAATGCATGTCTAATGGACCACTCAGAAGTCATTTGTATGGAACTGACCTTCCACCTTTATCATGGAAGCAACGGCTTGAAATTTGCATTGGATCAGCAAGAGGCCTTCATTATCTTCACACCGGTGCATCGCAAGGCATCATTCACCGTGATGTGAAGACAACAAATATCCTTTTAGATGATAACTTTGTTGCTAAAGTTGCCGATTTCGGCCTCTCCAAAACCGGTCCTTCTCTTGATCAGACTCATGTGAGCACCGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCCGAATACTTTAGACGACAACAACTTACAGAGAAGTCAGATGTGTATTCATTCGGAGTAGTTTTAATGGAAGTGTTATGCTCAAGACCGGCCTTGAATCCTGTCCTTCCAAGGGATCAGGTTAACATAGCTGAGTGGGCTATGAATTGGCAGAAAAAAGGGATGCTTGATCAAATCATTGATCAAAAGCTGATAGGGAATGTTAATTCTGCTTCTCTTAAGAAGTTCGGTGAGACAGCCGAGAAGTGCTTAGCTGAGTACGGTGTGGATAGGCCTTCTATGGGAGATGTCTTATGGAATCTTGAATATGCTTTGCAGCTCCAAGAGACCGCCGCATCAGCACTCATGGAACCTGAAGATAGCAGCACAAACCACATCATTGGAATTCAGTTGTCTTCTCATAATTTTGACAACGGCGTTCATAAGACTGATGGAGGAACTTCTGCCACCAATGGTGATGCAGAACAGGCTGCAACAAGTGTAGTGTTCTCGGAGTTGGTAAATCCTCGCGCAAGATGA 2550 0.4102 MVVMMMVMKLVKLVFSVLFVFLFLVNASFALYIPPDNYLISCGSSQNITFQGHTFIPDSQYSSLMSKTGDSIVAISNSSVVVPFPIYQSARIFTQKASYTFEIVQEGRHWVRLYFYPVPNSDHDLTSAAITVVADEFVLLSNFTFRNYNGSYMFKEYAINVTSVTLTVTFIPSNDSVTFVNAIEVVSMPDELFIDQALALNPPAPFSGLSELAFETVYRLNIGGPLLNAQNDTLGRTWESDLKYLHMKSSVTIVSVSPSTIKYPAGVTPETAPNRVYATADAMGNANVADSNFNITWVFPVDPNFSYFIRVHFCDIISMSLNTLLFNLFINTDIALGNLDLSSLTNELAVPYYKDFVSNVSAGSETLTVSVGPDTMADITNATMNGLEIMKISNGLKSFDGFSSVGSLLPNSPSNKKKMGIVVGSVGAVAAIVLFGLCYCCFVGRNSKSTEHGRPLLSLPSLYGNFQTMSMMSTTSHKSATASCISLSSINLGRIFTFHEIQDACNKFDEKLLLGVGGFGRVYKGTLDDGTNVAVKRGNASSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYECMSNGPLRSHLYGTDLPPLSWKQRLEICIGSARGLHYLHTGASQGIIHRDVKTTNILLDDNFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCSRPALNPVLPRDQVNIAEWAMNWQKKGMLDQIIDQKLIGNVNSASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETAASALMEPEDSSTNHIIGIQLSSHNFDNGVHKTDGGTSATNGDAEQAATSVVFSELVNPRAR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1652 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lal1g1652 849 CDD STKc_IRAK 514 779 - -
Lal1g1652 849 Pfam Protein tyrosine and serine/threonine kinase 513 774 IPR001245 GO:0004672|GO:0006468
Lal1g1652 849 Gene3D - 212 393 - -
Lal1g1652 849 Gene3D - 37 189 - -
Lal1g1652 849 SMART serkin_6 508 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1652 849 PANTHER OS07G0166700 PROTEIN 24 837 IPR045272 GO:0004714|GO:0006468
Lal1g1652 849 Pfam Malectin-like domain 40 392 IPR024788 -
Lal1g1652 849 SUPERFAMILY Protein kinase-like (PK-like) 486 779 IPR011009 -
Lal1g1652 849 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 24 837 - -
Lal1g1652 849 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Lal1g1652 849 Gene3D Phosphorylase Kinase; domain 1 466 582 - -
Lal1g1652 849 ProSiteProfiles Protein kinase domain profile. 508 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1652 849 Gene3D Transferase(Phosphotransferase) domain 1 584 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1652 Lal-Chr1 18940947 18943496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1652 32 849 Receptor kinase-like Gene Family AT3G46290 51.322 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal1g1652 Malectin_like 1.5e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1652 - - lang:109357111 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0308 20 2357232 2359760 Lal1g1652 1 18940947 18943496 LSH
Lal11g1398 11 17429711 17432726 Lal1g1652 1 18940947 18943496 LSH