Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1633 ATGGCTGCCAGAGAAATCCTCAATAAGATGAAGGAAAAAGTGTTGGGTTCATCAGATTCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAACATAACTCATGGCTTTTACTTGGTAAAGGGAAGATCATATCATCCCATGGAGGACTATGTTGTTGCTCAGTTTAAGAAAGTCGAAAGCAACGAATTAGGTTTGTTTGCGATATTCGATGGCCACGCCGGTCACAACGTTCCTAATTATCTTCGATCTCATTTGTTCGATAATATCTTAAACGAGCCTGACTTCTGGAAAGAACCTACAGATGCTATCAAGAGAGCATATGATGTAACTGATTCTACCATTTTAGAGAAATCAGGTGAGTTGGGCAGAGGGGGTTCAACTGCAGTTACAGCGATATTGATCAATGGTCAGAAATTAGTAGTAGCCAATATCGGCGACTCTCGTGCAGTCTTATGCAAGAATGGCGTGGCCAAACAAATATCGGTCGATCACGAGCCGACCACAGAAAGCGAGGATATAAAGAATAGGGGTGGCTTTGTATCAAGGTTTCCAGGGGATGTTCCACGAGTCGATGGACGATTGGCCGTTTCGAGGGCATTTGGTGACAAAAGTTTGAAGAAACACTTGAGCTCAGAACCATATGTGACAGTGGAGATGATACATGATGATGCAGAGTTTATTATATTAGCCAGTGATGGATTGTGGAAGGTAATGTCAAATCAAGAAGCAGTTGACACTATCAGGGAAGTGAAAGATGCTCGGTCTTCGGCGAAGCGGCTTACAGAAGAAGCACTTGGAAGGAAAAGCACAGATGATATCTCCTGCATTGTTGTGAAATTTCAATGA 849 0.4264 MAAREILNKMKEKVLGSSDSDSGKGKSKMSKNITHGFYLVKGRSYHPMEDYVVAQFKKVESNELGLFAIFDGHAGHNVPNYLRSHLFDNILNEPDFWKEPTDAIKRAYDVTDSTILEKSGELGRGGSTAVTAILINGQKLVVANIGDSRAVLCKNGVAKQISVDHEPTTESEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPYVTVEMIHDDAEFIILASDGLWKVMSNQEAVDTIREVKDARSSAKRLTEEALGRKSTDDISCIVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1633 282 Coils Coil 244 264 - -
Lal1g1633 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Lal1g1633 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Lal1g1633 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lal1g1633 282 SMART PP2C_SIG_2 50 281 IPR001932 -
Lal1g1633 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Lal1g1633 282 CDD PP2Cc 35 281 IPR001932 -
Lal1g1633 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Lal1g1633 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lal1g1633 282 SMART PP2C_4 29 279 IPR001932 -
Lal1g1633 282 Gene3D - 29 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1633 Lal-Chr1 18747054 18750752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1633 1 282 PP2C-type Phosphatase Gene Family AT3G15260 73.010 3.04e-158 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1633 K17506 - gmx:100500617 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1633 1 18747054 18750752 Lal1g1633 1 18747054 18750752 ECH