Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1629 ATGGCGAAAACGAGACCGGGAAAAAGAGACATAGATTCATACACAATCAGAGGCACAAATAAGATCGTAAGAGCTGGTGATTGTGTTTTGATGCGTCCTTCAGATACAAGCAAACCACCGTATGTGGCGCGGGTAGAGAAGATTGATCAAGATGGTAGGAGCAATGTGAAGGTGCGTGTGAGATGGTATTATAGGCCTGAAGAGTCAATTGGAGGAAGAAGACAGTTCCATGGAGTAAAAGAGCTTTTTTTGTCTGACCATTATGATGTTCAAAGTGCTCACACCATTGAAGGGAAGTGTGTTGTACACTCCTTTAAGAGCTATACTAAGCTTGAGAATGTAGGCGCCGAGGATTATTATTGTAGGTTTGAGTACAAGGCTGCTACCGGGGCTTTCACTCCGGACCGTGTTGCTGTGTATTGCGAATGTGAGATGCCTTATAACCCGGATAACCTCATGGTGCAGTGTGAGGGGTACCATCCTGCTTGTGTGGGCATGACTATTGAAGAAGCAAAGAAGTTAGACAACTTTGCATGTTCTGAATGTTCATCCGACGATGACTTGAAGAAACCCCACCTTACATTTCCTGTATCACCAGCATCTGATGGCAAGTTGCAGGTGGAGCCGAAGCGGCAGAAGAGAGGACCGTGA 651 0.4578 MAKTRPGKRDIDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIDQDGRSNVKVRVRWYYRPEESIGGRRQFHGVKELFLSDHYDVQSAHTIEGKCVVHSFKSYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCECEMPYNPDNLMVQCEGYHPACVGMTIEEAKKLDNFACSECSSDDDLKKPHLTFPVSPASDGKLQVEPKRQKRGP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1629 216 SMART BAH_4 21 136 IPR001025 GO:0003682
Lal1g1629 216 SMART PHD_3 140 183 IPR001965 -
Lal1g1629 216 MobiDBLite consensus disorder prediction 182 216 - -
Lal1g1629 216 SUPERFAMILY FYVE/PHD zinc finger 132 186 IPR011011 -
Lal1g1629 216 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Lal1g1629 216 PANTHER BNAC03G64850D PROTEIN 3 209 IPR045205 GO:0006325|GO:0035064
Lal1g1629 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 194 IPR013083 -
Lal1g1629 216 Gene3D - 2 132 IPR043151 -
Lal1g1629 216 Pfam BAH domain 23 135 IPR001025 GO:0003682
Lal1g1629 216 PANTHER OS08G0421900 PROTEIN 3 209 - -
Lal1g1629 216 CDD BAH_BAHCC1 22 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1629 Lal-Chr1 18703179 18706888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1629 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 4.53e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1629 K25868 - gmx:100800993 411.379