Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1618 ATGGCAGGAGTGGGACCCATATCACAGGATTGGGAACCGGTGGTGATAAGGAAGAAAGCACCAACCTCTGCGGCGAAGAAAGATGAGAAAGCTGTGAACGCTGCTCGTCGTTCTGGCGCTGAGATTGAAACCCTCAAAAAATCAACTGCTGGGACAAACAAAGCCGCCTCTACTAGCACTACTCTGAACACAAGGAAACTCGATGAAGAAACTGAGAATCTTCACCATGAAAGGGTACCAACCGAGTTGAAGAAAGCCATCATGCAGGCTAGGCTCGAGAAAAAACTCACTCAGGCGCAGCTGGCTCAGATGATTAATGAAAAGCCTCAGATTATACAAGAGTATGAATCTGGAAAAGCCATTCCAAATCAACAAATAATCGGAAAACTTGAGAGAGCTCTCGGCGCGAAACTGCGCGGAAAGAAGTGA 429 0.4709 MAGVGPISQDWEPVVIRKKAPTSAAKKDEKAVNAARRSGAEIETLKKSTAGTNKAASTSTTLNTRKLDEETENLHHERVPTELKKAIMQARLEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1618 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Lal1g1618 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Lal1g1618 142 MobiDBLite consensus disorder prediction 45 64 - -
Lal1g1618 142 CDD HTH_XRE 85 135 IPR001387 -
Lal1g1618 142 MobiDBLite consensus disorder prediction 21 43 - -
Lal1g1618 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Lal1g1618 142 Coils Coil 87 107 - -
Lal1g1618 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Lal1g1618 142 SMART mbf_short4 86 141 IPR001387 -
Lal1g1618 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lal1g1618 142 MobiDBLite consensus disorder prediction 1 76 - -
Lal1g1618 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Lal1g1618 142 Gene3D - 71 142 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1618 Lal-Chr1 18596608 18599305 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lal1g1618 MBF1 3.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1618 K03627 - qsu:112033276 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1618 1 18596608 18599305 Lal1g1618 1 18596608 18599305 ECH