Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1611 ATGGCAAATGTTTGTAATATTTTCCTTTACTCTCTCCATTCACTTCTCTTTTCACATTCAACGCTTTTCCTCACCCAAACATCTCCAAATCTTTCCGGCAAGTTTTCCGTCGAAAATGCTTCTCCGATCTCGCTCCGATTAGTAAACGCCGTCGTTTCATTTCACCTCAATCCGGCGTCGTTTTGCTCCGATTCGAAGCTCAAAACAACTAATTCCGTACTTCAATACAACAAAAAACGATGTCTCTTTAACGTAATTTACTCGACAATTCGCACTTTTTTCTACCTTCCGAGTTTCTGTTTTCCGCTTTTACCGGCGATGACGTCAGGGACTAGGCAACCAACGTGGAAGGAGAGGGAGAACAATAAGAAGAGGGAGAGGAGGCGAAGAGCGATAGCGGCGAAGATCTTCGCCGGTCTTAGAATGTATGGGAACTACAAGCTCCCTAAGCATTGTGACAACAATGAAGTTCTCAAAGCTCTTTGTGATGAAGCTGGGTGGACCGTTGAAGCTAATGGCACCACTTATAGGAAGGGATGCAAGCCTGTTGAACAAATGGACATGGTAGGTGGTTCTGCAGTGGGAACCCCATGCTCATCTTACAATCCAAGTCCCTGTGCTTCATACAATCCAAGTCCAGGCTCTTCTTCCTTCCCTAGTCCATGCTCATCTTTTAATGCTGCAAATCCTAACAGTGCTGATGGAAATTCCCTCATACCATGGCTCAAAAACCTATCATCAGGATCATCATCAGCATCCTCATCTAAGTTCCCCCACCTATACATTCATAGCGGCTCCATCAGTGCCCCTGTCACTCCTCCATTAAGCTCCCCAACTGCGAAAACACCGCGACTCAATGCCAATTGGGATGATCAATTCAACTCCAATCGTCCTTCATGGCTTGGACAGCAGCAGTACTCATTTCTACCCTCTTCCACCCCTCCAAGCCCTGGCCACCAAGTTCTCGACCCGGATTGGTTTGCTGGGATTAGGATTCCTCAGGGTGGGCCAGCTTCTCCAACCTTCAGCTTGGTCGCTTCCAACCCATTTGGCTTCAAGGAAGAGGTTTTTGTTGGCAGTACTAGTGGCTCCCGCATGTGGACACCTGGGCAAAGTGGGACATGTTCTCCAGCTGTTGCTGCTAGTTCTGATCACACTGCTGACACTCCAATGACTGATGCAGTTTCAGATGAATTTGCCTTTGGAAGCAGCACTGCAGGTTTAGTGAAGCCCTGGAAAGGAGAGAGGATCCACGAAGAAATTGTATCAGATGATCTTGAGCTCACTCTTGGGAACTCAAAAACCAGGATATGGGTGACAGATTTCTTAGATTTAAGTGTGGGTGGATGGTGCTTGGCATCTCAGAGTGCTCCATTCCTGGCTGGGTTAGCTAGACCAAAACTTAGTGTTGTTGTGGATAGGTGGGTTTGGACAGGAAGCTTTGATGGCATTTACTCTTATGCTTCAGCGTACTATTGGCTTATATGTGGCCTTCTCCAGAGC 1503 0.4711 MANVCNIFLYSLHSLLFSHSTLFLTQTSPNLSGKFSVENASPISLRLVNAVVSFHLNPASFCSDSKLKTTNSVLQYNKKRCLFNVIYSTIRTFFYLPSFCFPLLPAMTSGTRQPTWKERENNKKRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEANGTTYRKGCKPVEQMDMVGGSAVGTPCSSYNPSPCASYNPSPGSSSFPSPCSSFNAANPNSADGNSLIPWLKNLSSGSSSASSSKFPHLYIHSGSISAPVTPPLSSPTAKTPRLNANWDDQFNSNRPSWLGQQQYSFLPSSTPPSPGHQVLDPDWFAGIRIPQGGPASPTFSLVASNPFGFKEEVFVGSTSGSRMWTPGQSGTCSPAVAASSDHTADTPMTDAVSDEFAFGSSTAGLVKPWKGERIHEEIVSDDLELTLGNSKTRIWVTDFLDLSVGGWCLASQSAPFLAGLARPKLSVVVDRWVWTGSFDGIYSYASAYYWLICGLLQS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1611 501 Pfam BES1/BZR1 plant transcription factor, N-terminal 109 246 IPR008540 -
Lal1g1611 501 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 71 436 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lal1g1611 501 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 71 436 - -
Lal1g1611 501 MobiDBLite consensus disorder prediction 367 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1611 Lal-Chr1 18526043 18537097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1611 107 436 BZR Transcription Factor Family AT1G78700 68.639 4.74e-129 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal1g1611 BES1_N 7.7e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1611 - - lang:109348092 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1611 1 18526043 18537097 Lal1g1611 1 18526043 18537097 ECH
Lal20g0392 20 3115158 3121168 Lal1g1611 1 18526043 18537097 LSH