Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1610 ATGAACATAACTTACCATGGGTTCTTCTTCCTTATGCTACTTTCTGCCTTTTACTTATCCTCTTTAGCTTTTGGAGCCACTTTATCCAATGATGAAGTGGAAGCTCTGAAAGACATAGCAAAGACACTTGGTAAAAAGGATTGGAATTTTAGCGTAGATCCATGCAGTGGACAAAGTAACTGGACATCACTTGTTCAAGTTAAAGGATCAGAAAATGCTGTCACATGCAATTGCTCTTATGCCAATGCATCCATTTGCCATGTTACTAACATACTTTTGAAATCACAAAATCTACCAGGCACACTCCCTCCAGAATTAGTAAGGCTACCTTACCTTCAAGAAATTGACCTTACTCGCAACTACTTGAATGGTAGCATTCCTAAAGAATGGGGCTCCATGAAATTGGTCAACATTTCTTTGCTTGGAAATCGAATATCAGGTTTAATACCTATAGAGATAGCAAACATATCCACCCTCCGAAGCTTTGTTGTGGAGGCCAATCAATTATCTGGAAATCTACCTGATGAGCTTGGGAATCTATCTCAGATTCAAAGAATGTTACTTTCTTCCAACAATTTTAGTGGAGAGATACCTCCAACATTTGCCAAGCTCACTTCATTGCAGGATTTTCGAATTCAAGATAATCAATTCTCTGGGAAGATACCTAATTTTATTCAATCTTGGACAAGTCTCGAGAAACTAGTGATTCAAGGGAGTGGATTGAGTGGGCCAATTCCTTCTGGAATTTCACTTATGAAAAACTTAACTGACTTGAGAATTAGTGATTTGAAAGGATCTGAATTTTCACCACTTCCAAAACTTAATAATCTAGCATTGAACTATCTGATTTTGAGGAGTTGCAACATTAATGGAACACTACCTGAAAATCTTGGGGCAACGGATAATTTAAAAACCTTAGACCTCAGTTTTAACAGATTAAGTGGACAAATCCCAAGTACATATGAAAGCTTACAAAAAACAGCGTCATACATATATTTAACTGGAAATCTTCTCACTGGAGTATTACCTGCATGGACAAAAAAAGCTAGTAACATGGATGTTTCATATAATAACTTTAGTGTTGAAAGTATTGGGAGTGAGACATGTCAAGATGGAAATGTTTTTGTAAAAATCAATGGAAGCACATATGATGATGATTTAGATGCTGAAGGACCAGCAACGTTCCAACATAGTGGAACAAGAAACTGGGGTTTTAGTAGTACTGGTAACTTCATGGATAGTGATATTTTACGAGACTACTATACTGTTCGGAATCTATCTAAGCTTTCTACAACGAATGTTGAATTGTACATGAATGCACGCGTTTCTCCAATTTCACTCACTTATTATGGATTTTGCCTCAAAAATGGAAACTACACTGTTAATCTGCATTTTGCGGAGATCATGTTCACTAATGATCAAACATATAACAGTCTAGGAAGGCGTTTATTTGACATCTACATTCAGGGGGAACTGGTGAAAAAGGACTTCAATATAGTAGAAGAAGCAGGAGGAGTTGGTAAGGAAATTATAAAACCGTTCCATGCTATTGTCACTAATACTACCTTGGAGATCCGCTTATACTGGGCTGGAAAAGGAACTAATTCACTTCCAAATAGATCAGTTTATGGTCCTCTTATATCAGCTATATCTGCGAAATCTGACTCTATGCCCCCATCGGAAAATGGAAGTAGCATACCTGTAGGAGTTGTGGTTGGAATTGTGGTCACCATAGCAGTTATTGTTGCACTGGTAATTGGCATACTTTGGTGGAAATGTTGTCTAGGAAAGAAAAACTCTTTAGGAGAAGAGATAAGGGGCTTAGATATACATACATCGATTTTTACCTTACGACAAATCAAAGCAGCAACAAACAACTTTGATATTGCCAATAAGATTGGAGAAGGAGGATTTGGACCTGTGTTCAAGGGAATTCTATCAGATGGGACAATAATAGCAGTGAAGCAGCTTTCTTCGAAGTCAAAGCAAGGGAATCGTGAATTTTTAAATGAAATTGGCATGATTTCTGCATTGCAACACCCATATCTTGTTAAACTCTATGGTTGTTGTGTTGATGGAGATCAACTATTGTTGGTATATGAATATTTGGAAAACAATAGCCTTGCTCGTGCCTTATTTGGCCCAAAAGAACATCAAATAAAATTGGATTGGCCCACAAGGCACAAAATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCTAAGATATCTGACTTTGGTTTAGCCAAGCTTGATGAAGAGGATAACACTCATATTAGCACCCGAATCGCTGGGACATATGGATATATGGCTCCAGAATATGCCATGCATGACAAAGCAGATGTCTATAGTTTTGGAGTTGTTGCCTTAGAAATCATAAGTGGGAAGAACAATACGACTCGTCGACAAAATGGAGAAGCAATACTTCTTCTTGATTGGGCAAATCTGTTGAAAAGTGAAGGTAATCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTTCAAGAAAGAAGAGGTAATGGTGGTAATAAATGTGGCTCTTCTATGCACCAATGTGACTCAAACATTAAGGCCTGCAATGTCTTCAGTTGTAAGCATGCTAGAAGGTAGAAGTGTTGTACATGAAGTGGTTTCAGAATCAAATGAGGTATTGGATGAGAAGATGGAGAAAATGAGACTACTTTACAAAGAGATCCATGAACATAGTAGTATCTCAATGGAGGGGCCATGGACTGCTTCATCAACTTCTGCAGCAGATCTATATCCTGTGCACATTGATTCTTCTTACTTGGAAGAGAGAAATTAG 2886 0.3777 MNITYHGFFFLMLLSAFYLSSLAFGATLSNDEVEALKDIAKTLGKKDWNFSVDPCSGQSNWTSLVQVKGSENAVTCNCSYANASICHVTNILLKSQNLPGTLPPELVRLPYLQEIDLTRNYLNGSIPKEWGSMKLVNISLLGNRISGLIPIEIANISTLRSFVVEANQLSGNLPDELGNLSQIQRMLLSSNNFSGEIPPTFAKLTSLQDFRIQDNQFSGKIPNFIQSWTSLEKLVIQGSGLSGPIPSGISLMKNLTDLRISDLKGSEFSPLPKLNNLALNYLILRSCNINGTLPENLGATDNLKTLDLSFNRLSGQIPSTYESLQKTASYIYLTGNLLTGVLPAWTKKASNMDVSYNNFSVESIGSETCQDGNVFVKINGSTYDDDLDAEGPATFQHSGTRNWGFSSTGNFMDSDILRDYYTVRNLSKLSTTNVELYMNARVSPISLTYYGFCLKNGNYTVNLHFAEIMFTNDQTYNSLGRRLFDIYIQGELVKKDFNIVEEAGGVGKEIIKPFHAIVTNTTLEIRLYWAGKGTNSLPNRSVYGPLISAISAKSDSMPPSENGSSIPVGVVVGIVVTIAVIVALVIGILWWKCCLGKKNSLGEEIRGLDIHTSIFTLRQIKAATNNFDIANKIGEGGFGPVFKGILSDGTIIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVDGDQLLLVYEYLENNSLARALFGPKEHQIKLDWPTRHKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHDKADVYSFGVVALEIISGKNNTTRRQNGEAILLLDWANLLKSEGNLMELVDRRLGSDFKKEEVMVVINVALLCTNVTQTLRPAMSSVVSMLEGRSVVHEVVSESNEVLDEKMEKMRLLYKEIHEHSSISMEGPWTASSTSAADLYPVHIDSSYLEERN 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1610 961 SUPERFAMILY Protein kinase-like (PK-like) 610 898 IPR011009 -
Lal1g1610 961 Gene3D Ribonuclease Inhibitor 200 265 IPR032675 -
Lal1g1610 961 ProSiteProfiles Protein kinase domain profile. 627 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1610 961 ProSiteProfiles Leucine-rich repeat profile. 302 325 IPR001611 GO:0005515
Lal1g1610 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Lal1g1610 961 Gene3D Ribonuclease Inhibitor 266 370 IPR032675 -
Lal1g1610 961 Gene3D - 371 554 - -
Lal1g1610 961 SMART serkin_6 627 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1610 961 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 360 - -
Lal1g1610 961 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 290 - -
Lal1g1610 961 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 372 930 - -
Lal1g1610 961 Gene3D Phosphorylase Kinase; domain 1 597 702 - -
Lal1g1610 961 Gene3D Ribonuclease Inhibitor 30 199 IPR032675 -
Lal1g1610 961 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 372 930 - -
Lal1g1610 961 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 360 - -
Lal1g1610 961 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 77 290 - -
Lal1g1610 961 Pfam Malectin domain 372 550 IPR021720 -
Lal1g1610 961 Pfam Protein kinase domain 629 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1610 961 SUPERFAMILY L domain-like 84 359 - -
Lal1g1610 961 CDD STKc_IRAK 633 896 - -
Lal1g1610 961 Gene3D Transferase(Phosphotransferase) domain 1 703 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1610 Lal-Chr1 18482843 18498363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1610 22 946 Receptor kinase-like Gene Family AT1G53420 54.508 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal1g1610 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1610 - - gmx:732563 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1610 1 18482843 18498363 Lal1g1610 1 18482843 18498363 ECH