Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1594 ATGGTTGGATTCCATGATGATCATATGAATGAAAACATGTATAACAGCAACAATTCAATTTATTTCCCCGGTCGCGTTGAGCGGCTAGTAAGAGGAAGAGAGTTAAGAAAATGCAGCAGAGCTTTTCTTTCAAATGAGTCACCAGATAATAGCAACAACGAAAACTATAATAACAACATTATCAATGGAGTTACTGAATCTTTGGACCATGACCTGCATTTAAGAGAAGCTAATGGTAACAATAGTTCAGGTCATAATTCGCATTTCGATCGGTTTCTGGAGGGTGCAGCAGCAGCAAGAGGTTTTAGTGATGGGTATGAGAGGGATGATGGAAAGCCTTTTCGACAACGGCTTTTAGTGGTGGCGAATAGGCTTCCAGTTTCAGCAGTTAGGAAAGGTGAAGATATATGGTCTTTAGAGATAAGTGCTGGTGGTCTAGTCAGTGCTCTTTTAGGTGTGAAGGAATTTGAGGCAAGGTGGATAGGTTGGGCAGGTGTTAATGTGCCAGATGAGATTGGACAGAAAGCGCTTACAAAAGCATTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGCCTTGCTACCACGCGTAGTTTCCAGTCTCAGTTTGCAGCATATCAGAAAGCAAACCAAATGTTTGCCGATGTCGTGAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTCCTTCCACAATGCCTAAAGAATCATAACAGCAAAATGAAAGTTGGCTGGTTTCTCCATACCCCTTTTCCATCTTCTGAAATTTACAAGACACTGCCATCTCGTTCCGAGCTCCTGCATGCTGTTCTCGCGGCAGATTTAGTCGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGTGCATGCACTCGGATCCTTGGACTAGAGGGCACGCCTGAAGGGGTTGAGGATCAAGGGAAGCTAACTCGAGTTGCTGCATTTCCGATTGGTATAGACTCGAAGCGATTCATACGTGCACTTGAACTTCCTCTAGTCCAGGAGCACATCAAAGAATTACAAGAAAGATTTAAAGGCAGGAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAGTTTTTAGAAGAGAATGCTTATTGGCGTGATAAAGTTGTTCTGCTTCAGATTGCTGTGCCAACAAGAACAGACGTTCCTGAGTATCAAAAGCTCACAAGCCAGGTCCATGAAATTGTTGGTCGGATCAATGGCAGATTTGGAACACTGTCTGCTGTTCCTATTCATCACCTGGATCGCTCTCTTGACTTCCAGGCTCTATGTGCTTTGTATGCCATCACAGACGTTGCATTGGTCACATCCTTGAGAGACGGCATGAATCTTGTCAGTTATGAATTTGTGGCATGTCAAGATGAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCGGGTGCTGCTCAGTCTCTTGGTGCTGGTGCAATTCTAGTCAACCCCTGGAACATCACAGATGTTGCTGCTGCAATAGCCAAAGCTTTGAATATGCCATCTTCAGAAAGAGAGAAACGGCATAGGTATAATTATCATCATGTCAAAACCCACACTGCTCAAGAATGGGCCGATATTTTTGTAAGTGAGCTAAACGATACCGTTGTTGAGGCACAGCTACGGACAAAACAAGTTCCACCCCGCCTGCCAACCAAGACTGCCATTGAACATTATTTGCAATCAAATAATCGGTTGCTCATTCTGGGATTCAATGGAATATTAACCGAACCTGTTGAGAGAAAAGGTGATCAGTATAAAGAAATGGAACCGACTGTGCATCCAGAACTCAAAGAAGTGTTGGTAGAACTTTGCCATGACTCGAAGACCACGGTTGTTGTGCTTAGTGGAAGTGGAAGAACGGTTCTAGATGAAAACTTTAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGAATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAGCTAAACATGGAGTGGGTTGACAGCGTGAAGAACACCTCGGTCACATTTCGAAGAAAGGGAAGCTTCACTTGTGTGGAATTACAAACATGCAGGTGCTTAAGTTGTGCTTATGAAGACTTTTTATGTGTTTCGCCTTCTGTATTTCCAATTATTGATCCTCTCGCAATGATCATAGATGTTGAGTTCGGAAGAATTCAAGCAAGAGAATTGCTGCAGCATCTCTGGACGGGTCCAATTTCTAATGCAGCGGTTGAAGTTGTTCAAGGAAGCAGATCTGTCGAGGTGCGAGCTGCAGGTGTTACAAAGGGAGCAGGCATTGACCGCATCCTCGGTGAGATTGTCCATAATAAATCCATGACAACGCCAATCGATTATGTTCTCTGTGTAGGACATTTTCTGACAAAGGACGAAGATATATATGCCTTTTTCGAGCCAGAGCTTCCTTCTATTGGTGTATGTCTTCCGCGCGGTAAGGTTACAGATGGAACTAAGTTTAATAATGGTGAGAGGATATCATCTATGAAGACCCCAACACAGAAAATTGGGCTAAAATCATTGCAAAATATGGCGCAGCGGCCTCAAGCAAATGCCGAGAAGAAACAAGCGAATCATATCGCCCGGACACCAAGGCGGCCAGCTCCCGAAAAGACATCTTGGAATGTGCTTGACCTGAAAAAAGAGAATTACTTCTCGTGCGCGGTTGGAAGAACTCAGACAAATGCTAGGTACACCCTCGGATCCTCGGATGATGTTGTTTCATTTCTGAAGGAATTAGCAGCTGCATCTTCTTACTATTCATTCTGA 2919 0.4306 MVGFHDDHMNENMYNSNNSIYFPGRVERLVRGRELRKCSRAFLSNESPDNSNNENYNNNIINGVTESLDHDLHLREANGNNSSGHNSHFDRFLEGAAAARGFSDGYERDDGKPFRQRLLVVANRLPVSAVRKGEDIWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKNHNSKMKVGWFLHTPFPSSEIYKTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSKRFIRALELPLVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLSAVPIHHLDRSLDFQALCALYAITDVALVTSLRDGMNLVSYEFVACQDEKKGVLILSEFAGAAQSLGAGAILVNPWNITDVAAAIAKALNMPSSEREKRHRYNYHHVKTHTAQEWADIFVSELNDTVVEAQLRTKQVPPRLPTKTAIEHYLQSNNRLLILGFNGILTEPVERKGDQYKEMEPTVHPELKEVLVELCHDSKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKNTSVTFRRKGSFTCVELQTCRCLSCAYEDFLCVSPSVFPIIDPLAMIIDVEFGRIQARELLQHLWTGPISNAAVEVVQGSRSVEVRAAGVTKGAGIDRILGEIVHNKSMTTPIDYVLCVGHFLTKDEDIYAFFEPELPSIGVCLPRGKVTDGTKFNNGERISSMKTPTQKIGLKSLQNMAQRPQANAEKKQANHIARTPRRPAPEKTSWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVSFLKELAAASSYYSF 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1594 972 Gene3D Glycogen Phosphorylase B; 364 567 - -
Lal1g1594 972 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 116 585 - -
Lal1g1594 972 SUPERFAMILY HAD-like 615 964 IPR036412 -
Lal1g1594 972 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 117 582 IPR012766 GO:0003825|GO:0005992
Lal1g1594 972 CDD GT20_TPS 117 582 IPR001830 GO:0003824|GO:0005992
Lal1g1594 972 Pfam Trehalose-phosphatase 765 857 IPR003337 GO:0003824|GO:0005992
Lal1g1594 972 Pfam Trehalose-phosphatase 637 717 IPR003337 GO:0003824|GO:0005992
Lal1g1594 972 Gene3D - 769 971 IPR023214 -
Lal1g1594 972 Gene3D Glycogen Phosphorylase B; 109 363 - -
Lal1g1594 972 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 47 964 - -
Lal1g1594 972 Pfam Glycosyltransferase family 20 117 582 IPR001830 GO:0003824|GO:0005992
Lal1g1594 972 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 47 964 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1594 Lal-Chr1 18312871 18341665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1594 9 968 Trehalose Biosynthesis Gene Families AT1G78580 71.311 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1594 K16055 - gmx:100789554 1476.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1594 1 18312871 18341665 Lal1g1594 1 18312871 18341665 ECH