Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1587 ATGCAGCAATGTCAGTCCAAAAAGAAGGATATGAAAGAATTTGAGTTTTTCACTGAGTATGGAGATGCTAACAGATACAAGTTTCTTGAAGTTATTGGAAAAGGTAGCTTTGGAGTTGTTTGTGCAGCAATTGACACACACACTGGGGGAAAAGTTGCAATAAAGAAGATTCATGATGTTTTCGAGCATATTTGTGATGCCGTTAGAATCCTCCGCGAAATTAAGTTGCTAAGACTTCTTAGACACCCCGATATCGTCGAGATTAAGCGGATCATGTTGCCACCTTCAAAGAGGGATTTTAAAGATATTTATGTAGTCTTTGAACTCATGGAGTCTGATCTCCATAAAGTCATCAAAGCTAATGATGACTTGACTCATGAACACATTCGATTTTTCGTTTATCAGATGCTGCGCGCGTTGAAGTATATGCATACAGCAAATGTCTATCACAGAGACCTTAAGCCCAAGAATATACTGATAAATGCAAACAGCAAACTCAAAGTTTGTGATCTTGGACTTGCAAGAGTTTCATTCAGTGATGAACCATCAATAATATTTTGGACGAAGAGGGCGAACCTTGACACAAGGGATTATGTCGCGACGAGATGGTACAGAGCCCCAGAGCTGTGTGGATCATTCTCTTCCAAGTATACAGCGGCGATTGATATATGGAGCATTGGATGCATTTTTGCCGAGGTTCTGAGAGGAAAGGCGTTGTTTCCTGGTAAAAATGTCGTGCATCAATTAGTTTTGATTACTGATCTTCTTGGAACGCCATCACCTGAAATTATTAAAGGAGTTCGAAATAATAAGGCAAGGAAGTGCTTGATGGAAATGAAGAAGAAACTCCCGGTGCCGTTTGAAAAGAAATTTCCAAATGCTGACCCGTTGGCGCTTCGCCTTCTGCAAAGGCTTTTAGCATTTGATCCAAAGGATCGGCCAACAGCTCAAGAGGCACTAGCTGACCCTTTCTTTATGGGCTTGGCCAAAGTTGAGAAAGAACCGTCTTGTCCGCCAATTTCGAAACTGGAATTTGAGTTTGAGAGGAGACAAATGACAAAGGACGATGTTCGGGAGCTAATATATCGGGAAATACTCGAATATCATCCTCAAATGCTTAAAGATTACGAGAATGGAACTGAAGGCACAAACTTCCTTTATCCCAGTGCAATAGATCAATTCAAAAAGCAATTTGCTTATCTTGAGGAAAATCAGGGTAAAAGTGACCCACCGACTCCTCTAGAAAGGAAGCACGTCTCCCTTCCAAGGTCCACTGTTTATTCTAGTACAATTCCTCCTAGTACACAACCGTCATACGAGAACAAACAAATTGCAGCAGAACCAAATTCGGGAAGGGGTTCACAACCTCTTCCGACGGAGCCGACAGGGCCAGTTCCACCCTATGACAATGAGAGAAACATAAAAGATACTTATAATTCAAGCTTACCCTACCAAAACACTCTTCCTCAAGGAGTCTTTCCTCAATGTTTCCCTAAGGTGCAACAACCTACAAACAAGGATGTTCCATCACAGCAGTGTAACACGCCGACAAGAACATCGGCTGATGATCGCAATACGAGTCCATACCAGCAGCAGGAAAAGAGTGATCACTTGAATGATCCTGTCACTGCCATTGATGTGAAACTGTTGCAGACACACATGAAACCAGGGGGCTTTAAGTGTGGAATGTTATAG 1695 0.4206 MQQCQSKKKDMKEFEFFTEYGDANRYKFLEVIGKGSFGVVCAAIDTHTGGKVAIKKIHDVFEHICDAVRILREIKLLRLLRHPDIVEIKRIMLPPSKRDFKDIYVVFELMESDLHKVIKANDDLTHEHIRFFVYQMLRALKYMHTANVYHRDLKPKNILINANSKLKVCDLGLARVSFSDEPSIIFWTKRANLDTRDYVATRWYRAPELCGSFSSKYTAAIDIWSIGCIFAEVLRGKALFPGKNVVHQLVLITDLLGTPSPEIIKGVRNNKARKCLMEMKKKLPVPFEKKFPNADPLALRLLQRLLAFDPKDRPTAQEALADPFFMGLAKVEKEPSCPPISKLEFEFERRQMTKDDVRELIYREILEYHPQMLKDYENGTEGTNFLYPSAIDQFKKQFAYLEENQGKSDPPTPLERKHVSLPRSTVYSSTIPPSTQPSYENKQIAAEPNSGRGSQPLPTEPTGPVPPYDNERNIKDTYNSSLPYQNTLPQGVFPQCFPKVQQPTNKDVPSQQCNTPTRTSADDRNTSPYQQQEKSDHLNDPVTAIDVKLLQTHMKPGGFKCGML 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1587 564 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal1g1587 564 SUPERFAMILY Protein kinase-like (PK-like) 21 329 IPR011009 -
Lal1g1587 564 MobiDBLite consensus disorder prediction 473 538 - -
Lal1g1587 564 ProSiteProfiles Protein kinase domain profile. 26 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1587 564 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 465 - -
Lal1g1587 564 Gene3D Phosphorylase Kinase; domain 1 41 371 - -
Lal1g1587 564 SMART serkin_6 26 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1587 564 CDD STKc_TDY_MAPK 25 370 - -
Lal1g1587 564 MobiDBLite consensus disorder prediction 422 457 - -
Lal1g1587 564 Gene3D Transferase(Phosphotransferase) domain 1 112 348 - -
Lal1g1587 564 Pfam Protein kinase domain 26 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1587 564 MobiDBLite consensus disorder prediction 404 540 - -
Lal1g1587 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lal1g1587 564 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lal1g1587 564 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 11 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1587 Lal-Chr1 18261458 18266562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1587 1 557 MAP Kinase Gene Family AT1G53510 62.521 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal1g1587 Pkinase 2.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1587 - K04371 gmx:100800878 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1587 1 18261458 18266562 Lal1g1587 1 18261458 18266562 ECH