Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1563 ATGGCTGTGATCATCATTCCTGAAACCGTTGAACGAGCCATTGATTCTCTTCTAAAATGGAGAAATTCACAATCCCAGATCCAAAAATCAAAACTTTTGGACCAAGATGACGAATTCATCTACCTCACCCTAACCCTTAAGAAGGTCCCTCCAAAGGGCCGCGTTAACCCACACAAGGTCCCTCTCCCACATTCCCTTACTTCTGAATTCTCTGAAAGATGTTTAATTATTGATGACAGACCCAAATCAAATCTTACTAAAGCTGATGCTGAGAAGAAGATTAAATCTGAGAGTATTCCGATTTCTGAGGTTTTGAAGTTATCGAAATTGGCTTCGGATTATCGCGCATTCGATGCGAAGCGTAAGTTGTGTGATTCTTATGATATGTTTTTTGCTGATAAGAGGATTGTGCCATTGCTGGCTAGGTTGTTGGGGAAGCATTTTTTGAAGAAGAAGAAAGTTCATTTGCCCTTGGATTTGCAGAAGAAGAATTGGAAGGAGCAGGTTGAGAAGGCGTGTTCCTCGGGGCTTTTGACGCTTAGGAGTGGGACTTGTAGTGTTGTTAGGGTTGCCAAGTTGAGTATGGAGAGGGATGAGATTGTGGAGAATGTTGTTGCGGCGATTGGTGGGGTCGTTGAGATTATTCCGAAGAAATGGGAGAATGTGAGGTCCTTTCATGTTAAGTTGTTGGAGTCGCTTGCGCTACCGGTTTATCAGGCTGTTCCTGATATTAAGTTGAGGATTGATGGGAGCAAGGCCGAGGAGGAGGAAGGTGAGATGAAGAAGTATGAGGAAGATGGTGGAGAGGTTCATGATCAGAAAATCGGGAAGAAGAAGAAGAAGAAGGGGAAGATTCATGAAGTTATATACATGAACGATAAAGTTGGTGAGGATGAGGATCTTGTTGTAGAAGATAAGCCGGGTAGTGAGGATGCTGGTGATTTGGACAATGATGAAATGGGTAGTGGAGAATTGGTTAATAAAAAGAGAAAGAAAGGGGTTAAAGTGGAAAATCGGGCTCTAGGTGAATTGAGCAGTGCCAAGAAGAAATTGAAGAACTCTGCCAAGGAAAGTGGCAAGCAGAAGAAGAAAGACAGGAAGGAAAATTTGATCGAGCAGTAA 1122 0.4278 MAVIIIPETVERAIDSLLKWRNSQSQIQKSKLLDQDDEFIYLTLTLKKVPPKGRVNPHKVPLPHSLTSEFSERCLIIDDRPKSNLTKADAEKKIKSESIPISEVLKLSKLASDYRAFDAKRKLCDSYDMFFADKRIVPLLARLLGKHFLKKKKVHLPLDLQKKNWKEQVEKACSSGLLTLRSGTCSVVRVAKLSMERDEIVENVVAAIGGVVEIIPKKWENVRSFHVKLLESLALPVYQAVPDIKLRIDGSKAEEEEGEMKKYEEDGGEVHDQKIGKKKKKKGKIHEVIYMNDKVGEDEDLVVEDKPGSEDAGDLDNDEMGSGELVNKKRKKGVKVENRALGELSSAKKKLKNSAKESGKQKKKDRKENLIEQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1563 373 MobiDBLite consensus disorder prediction 296 310 - -
Lal1g1563 373 SUPERFAMILY Ribosomal protein L1 31 238 IPR023674 -
Lal1g1563 373 MobiDBLite consensus disorder prediction 296 373 - -
Lal1g1563 373 Gene3D - 83 175 IPR016095 -
Lal1g1563 373 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 300 - -
Lal1g1563 373 MobiDBLite consensus disorder prediction 321 373 - -
Lal1g1563 373 CDD Ribosomal_L1 10 237 IPR028364 -
Lal1g1563 373 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 300 - -
Lal1g1563 373 MobiDBLite consensus disorder prediction 255 278 - -
Lal1g1563 373 Pfam Ribosomal protein L1p/L10e family 34 232 IPR028364 -
Lal1g1563 373 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1563 Lal-Chr1 17995200 17996321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1563 126 228 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 28.155 2.62e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1563 K14775 - mnt:21404260 409.838