Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1550 ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACGCGTTATAACGAGAATGAACAAGTTCCGCTTCTTCTTCAATGTGGTCACGGTTTCTGCAAAGATTGCCTTTCTAGAATGTTCTCCTCTTCTTCAGACTCAACTCTCACTTGCCCGAGGTGCCGCCACGTGTCCACCGTCGGGAACTCCGTTCAAGCGTTGCGCAAAAACTTCGCTGTTCTCGCACTCATCCACTCCGCTGCCAACGCGGCGAGTTTGGACTGTGACTACACTGACGATGAGGAGGACGAGGGGGAAGATGGCGGGGGTGGCCGTGGGGAGGAGGATGATGAGGAGAGGAGGCGGTTGCGCGGGGAGGAGACATCGAGTTCGGGAGGGTGCGAGCCGGTGATCGAGGTCGGGGCGCATCAGGACCTGAAATTGCTGCAGAGGATTGGGGAAGGGAGGAGGGCTGGTATGGAAATGTGGACAGCGGTGATTGGCGACAGTGGTGGGCGGAATAGGCACCAAGTGGCGGTGAAGAAGGTGGCTGTAGTGGAAGGGATGGATTTGGATTGGGTGCAGGGGAAGTTGGAGAGTTTGCGTAGGGCTTCAATGTGGTGTAGGAATGTGTGCACTTTTCATGGAGCAATGAAAGTGGAAGAGAGTTTGTGTCTTGTGATAGATAGGTGCTATGGATCAGTTCAGTCTGAGATGCAGCGCAATGAAGGGAGACTCACTTTGGAGCAAGTCCTAAGATATGGGGCAGATATTGCACGTGGGGTTGTTGAGCTTCATGCTGCAGGCGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCAACAATTTTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGTGACTCCTCAAAGATCCATTCGTGTATGGAATGTATTATGCTTAGTCCACATTATACAGCACCTGAGGCTTGGGAGCCTGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTCGGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTTCCATTCCTTGGGCTGGTTTAAGTGCAGAAGAAATTTACCGAGCAGTTGTTAAGGCAAAGAAATTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATTCCTAGGGAATTGTGGAAGATGATCGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAATGCAATGCTAGCAATATTTCTCCGCCATTTGCAGGAAATACCACACAATCCTCCTGCAAGCCCTGATAATGACTCTGTTAAAGGCTCTGTGTCAAATGTGACGGAACCTTCCCAAGTACCTGAATTAGAAATTCCTCAGGAAAGTCCAAACCATCTTCTTCATCGACTTGTGTCTGAAGGGGATGCCACTGGTGTTAGAGATCTTCTTGCAAATGTGGCATCAGAAAATGGCAACAACTACATATCTTCTCTACTGGAAGCCCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGGCGTGGTAGTGCAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAAGCAAATGTTGATGTCTTGGACAAAGACGGAGACCCCCCTCTTGTTTTTGCACTGGCAGCTGGGTCCCCAGAATGTGTTCGTAGCCTCATCACAAGAAATGCTAATGTGCGTTCACGATTGAGAGACGGCTTGGGCCCATCAGTGGCTCATGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTGCATAGGGCAATTTCCAAGAAGTACACAGACTGTGCTCTCATGATATTGGAGAATGGGGGCTGTAGATCAATGGCTATCTTGAATTCAAAGAATTTGACACCACTGCACTTGTGTGTGGCAACATGGAATGTCGCTGTTGTGAAGAGATGGTTGGAAGTTGCAACTTCTGATGAGATTGCCAAAGCAATTGACATACGTAGCTCCATCGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGATCATGAAAGTGAGGGTAGGGAACTGGTGCGGATATTGCTTGCAGCAGGAGCAGATCCTTCTGCTCAAGATTCACAGAATGGGAGGACAGTTTTGCATACAGCTGCTATGACTAATGATGTGGGCTTGGTTAAGGTTATTCTTGCTGCTTGTGTTGATGTGAACATTTGCAATGTGCATAACAGTATACCTCTTCACTTAGCCTTAGCTAGGGGCGCGAAGGAATGTGTTGGACTGCTTTTAGCTGCAGGGGCAGATTGTAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCACAGACAGCAAAAATGATACGTGAAAATCTTGATTGGCTCATTGTGATGCTAAGGAATCCCAATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACGCTACGTGACATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAATAGAGGAGTTTGTTTGTCTCCTACGATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCATAACTCCAACACATGGGTGGCAAGGTGCTAAGAAGAAGAGTGTTGGCTTTGTGCAAAGTTTTCTGGACAGAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGATTCATGTTTTGGCAAATGAAGTTATAAAAGTCATTCCATTGGACAGGGGACAACATGTACAGCTAAAAAAAGATGTAAAAGAGCCCAGGTTTGGTTGGCGCGACCAGTCACGTGACAGCATTGGGACAGTATTATGTGTTGACGACGATGGTATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGGGTTGAGGAATTTAATGTTGGAGACTGGGTTCGTATCCGTCCTACTCTAACATCTGCAAAGCATGGTTTAGGTTCTGTGACACCAGGAAGCATTGGTATTGTATATTGTATCAGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAACCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCTTTTAGGATTGGGGATCGGGTATGTGTGAAGCGGTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGCGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAACCGACCCATTCCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAGGATTTTAAGGTTGGTGATTGGGTCCGAGTGAAAGCTTCAGTGTCGTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGATAATTCATAGTTTGGAGGAGGATGGTGATGTGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTAACTGATGTGGAGAAAGCTCCTCCTTTTGAGCTGGGACAAGAAATTCATGTAATGGCATCTGTTACTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATCGACATGGATGGTGCTCTCAACGTGAGGGTCACTGGTAGGCACAGCTTGTGGAAAGTTTCTCCTGGTGATGCAGAACGACTTCCAGGATTTGAAGTTGGTGATTGGGTTCGCTCAAAATCAAGCCTGGGAACCAGACCAAGTTATGACTGGAGTGGTGCTGGGAGAGAAAGTTTAGCCGTTGTGCATAGTGTACAGGATTCTGGATACCTGGAGTTAGCTTGCTGTTTCCGTAAAGTGAAGTGGATCACTCATTACACTGATGTTGAAAAGGTTCCTAGCTTTAAAATCGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCGCAAGGGGTTATAACCAGCATTCATGCTGATGGAGAAGTCAGGGTCGCATTCTTTGGTTTACCAGGATTGTGGAGAGGAGATCCTTCAGACCTGCAGATTGAACAAATGTTTGAAGTTGGAGAGTGGGTGAGGTTGAAAGATAATGCAAATAATTGGAAATCGATTGGGCCAGGTAGTGTTGGTGTGGTACAAGGAATAGGGTATGAAGGAGATGAATTGGACAGAAGCACTTACGTTGATTTCTGTGGGGAGCAAGAAAAGTGGGTAGGTCTAAGTTCCCATCTTGAAAGAGTTGACAAGCTTTTTGTTGGACAGAAGGTTAGAGTTAAAGAATACGTAAAGCAACCAAGATTTGGGTGGTCAGGGCACACCCATGCAAGTATTGGAACTATACAAGCAATTGATGCTGATGGAAAGCTTCGAATATATACACCAGCAGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTGGAGATAGTAGAAGAGAAGGAGCTTTGCATTGGAGACTGGGTAAGGGTTAGAGCATCGGTTTCAACCCCAACCCATCAGTGGGGGGAAGTGAGTCATTCAAGCATTGGGGTGGTGCATCAGATGGAACATGAGGATCTGCGGGTGGCATTCTGTTTCATGGAGAAACTATGGCTATGTAAGGCATGGGAAATGGAGCGTGTTAGGCCATTTAAAGTGGGGGATAAGGTAAAGATCAGAGATGGACTGGTGAGCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAAGTAGTAGGCGTCGATGCAAATGGCAAACTAAGAATAAAGTTTCGGTGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCTGATATTGCCCTTGATGAGAAGTGA 4869 0.466 MKIPCCSVCQTRYNENEQVPLLLQCGHGFCKDCLSRMFSSSSDSTLTCPRCRHVSTVGNSVQALRKNFAVLALIHSAANAASLDCDYTDDEEDEGEDGGGGRGEEDDEERRRLRGEETSSSGGCEPVIEVGAHQDLKLLQRIGEGRRAGMEMWTAVIGDSGGRNRHQVAVKKVAVVEGMDLDWVQGKLESLRRASMWCRNVCTFHGAMKVEESLCLVIDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLNANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISSESDAWSFGCTLVEMCTGSIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPHNPPASPDNDSVKGSVSNVTEPSQVPELEIPQESPNHLLHRLVSEGDATGVRDLLANVASENGNNYISSLLEAQNADGQTALHLACRRGSAELVEAILEYEEANVDVLDKDGDPPLVFALAAGSPECVRSLITRNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAISKKYTDCALMILENGGCRSMAILNSKNLTPLHLCVATWNVAVVKRWLEVATSDEIAKAIDIRSSIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTVLHTAAMTNDVGLVKVILAACVDVNICNVHNSIPLHLALARGAKECVGLLLAAGADCNLQDDDGDNAFHIAAQTAKMIRENLDWLIVMLRNPNADIEVRNHSGKTLRDILEALPREWISEDLMEALMNRGVCLSPTIFEVGDWVKFRRTVITPTHGWQGAKKKSVGFVQSFLDRDNLIVSFCSGEIHVLANEVIKVIPLDRGQHVQLKKDVKEPRFGWRDQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFNVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGVAFCFRSKPFSCSVTDVEKAPPFELGQEIHVMASVTQPRLGWSNESPATVGKIVRIDMDGALNVRVTGRHSLWKVSPGDAERLPGFEVGDWVRSKSSLGTRPSYDWSGAGRESLAVVHSVQDSGYLELACCFRKVKWITHYTDVEKVPSFKIGQYVRFRTGLVEPRWGWRGAQPESQGVITSIHADGEVRVAFFGLPGLWRGDPSDLQIEQMFEVGEWVRLKDNANNWKSIGPGSVGVVQGIGYEGDELDRSTYVDFCGEQEKWVGLSSHLERVDKLFVGQKVRVKEYVKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKAWMLDPSEVEIVEEKELCIGDWVRVRASVSTPTHQWGEVSHSSIGVVHQMEHEDLRVAFCFMEKLWLCKAWEMERVRPFKVGDKVKIRDGLVSPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADIALDEK 1622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat profile. 509 542 IPR002110 GO:0005515
Lal1g1550 1622 ProSiteProfiles Protein kinase domain profile. 136 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1550 1622 PRINTS Ankyrin repeat signature 510 525 IPR002110 GO:0005515
Lal1g1550 1622 PRINTS Ankyrin repeat signature 706 720 IPR002110 GO:0005515
Lal1g1550 1622 SMART ring_2 6 51 IPR001841 -
Lal1g1550 1622 MobiDBLite consensus disorder prediction 440 462 - -
Lal1g1550 1622 MobiDBLite consensus disorder prediction 104 118 - -
Lal1g1550 1622 Gene3D - 654 764 IPR036770 -
Lal1g1550 1622 Gene3D - 577 653 IPR036770 -
Lal1g1550 1622 SMART ANK_2a 724 753 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 509 539 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 684 719 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 611 642 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 578 607 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 646 677 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 543 572 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 790 825 IPR002110 GO:0005515
Lal1g1550 1622 SMART ANK_2a 757 786 IPR002110 GO:0005515
Lal1g1550 1622 Pfam Protein kinase domain 164 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 1241 1362 IPR040847 -
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 1115 1233 IPR040847 -
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 1368 1489 IPR040847 -
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 865 983 IPR040847 -
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 1498 1616 IPR040847 -
Lal1g1550 1622 Pfam Mind bomb SH3 repeat domain 1045 1109 IPR040847 -
Lal1g1550 1622 MobiDBLite consensus disorder prediction 85 103 - -
Lal1g1550 1622 Gene3D - 464 576 IPR036770 -
Lal1g1550 1622 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Lal1g1550 1622 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lal1g1550 1622 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lal1g1550 1622 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lal1g1550 1622 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 1621 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lal1g1550 1622 MobiDBLite consensus disorder prediction 432 466 - -
Lal1g1550 1622 Gene3D - 765 851 IPR036770 -
Lal1g1550 1622 Pfam Ankyrin repeats (many copies) 581 630 IPR002110 GO:0005515
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat region circular profile. 509 531 - -
Lal1g1550 1622 MobiDBLite consensus disorder prediction 85 126 - -
Lal1g1550 1622 Gene3D Transferase(Phosphotransferase) domain 1 221 457 - -
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat region circular profile. 757 789 - -
Lal1g1550 1622 SUPERFAMILY Ankyrin repeat 492 832 IPR036770 -
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat profile. 543 575 IPR002110 GO:0005515
Lal1g1550 1622 SUPERFAMILY RING/U-box 5 57 - -
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Lal1g1550 1622 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 1621 - -
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat profile. 757 789 IPR002110 GO:0005515
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat region circular profile. 724 753 - -
Lal1g1550 1622 SUPERFAMILY Protein kinase-like (PK-like) 134 459 IPR011009 -
Lal1g1550 1622 ProSiteProfiles Ankyrin repeat profile. 724 756 IPR002110 GO:0005515
Lal1g1550 1622 Pfam Ankyrin repeats (3 copies) 491 571 IPR002110 GO:0005515
Lal1g1550 1622 Pfam Ankyrin repeats (3 copies) 703 788 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1550 Lal-Chr1 17774980 17794300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1550 150 434 MAP Kinase Kinase Kinase AT4G18950 26.460 2.44e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lal1g1550 Pkinase 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1550 K16279 - gmx:100777576 2971.03