Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1530 ATGCCATTTCAGATTTTCAGTAACATGTTACATATTCTGAATTTCCTCTTAAGGGGGTTTTGTTTTGCCCATTTGATGACATCTTCAAAGCCTGTCAAGATGCCTGACTTACCTCAGATAGACCTCAATTCAAGAGAAAATCTTAAGATAAGTCATAGTAGTGGCCATAATAGTTGTACAAATTCAGGAACAAATTCACCAACTCACCCAACAAAGTTGAATGAAGTAGCAAAAGATGGTAGCACAAATGAATTTTCAACAAGTGAAGTTGGAAGTGTAAATTTAGACCAAGTTTCTAAAACTGAAGCAAAGTTGATAACTAAATCTAATAGACCTCATAAATTAGCACCATCAACCAGAAACATTTCTGATTTCTCTACTCAAAGTCCAAGAACAAAGAAGCCTTCAAATTTTGACCCTGCAATTACCACACCAGGACTTCCAACAGGAGTTGCTAAAGGAATGTCCACACATTCAAAGAACACCAATCAAGGGCCCGGAAGTGGCGCTAGCTCTCGCAGCGATAGTCTAGAGAGCACGAGTGCAACCATTAGGCCTCACACCGGTGGTGATGTAAGGTGGGATGCAATTAACATTGCTGCAAGGGGTGGTACCCTTAATCTTAAAGACTTCAGGCTTCTCAAGCGGATCGGATACGGAGACATCGGGAGTGTATATCTTGTGGAACTTAAAGGAACTAAAGCTCACTTTGCAATGAAAGTAATGGACAAAGCAGCTCTTATCAGTAGAAATAAGCTTCTGAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAGTTCTGTAGTGGTGGTGATCTTCATTCTCTTAGACAGAAACAACCTAACAAGTGTTTCACCGAAGAAGCTGCAAGGTTTTATGCTTCAGAGGTTTTGTTAGCTCTTGAGTACCTGCATATGCTTGGCATTGTATACAGAGACTTAAAGCCTGAGAATCTTCTAGTGAGAGATGAAGGCCACATCATGCTCTCGGATTTCGACTTATCGCTTCGCTGTTCGGTTAATCCTACCCTTGTAAAATCTTCATCTGCCAATGCAAGCAATGGTAGTAGTGACTCTGGAGCCATGTTAGGCGAAGAACAAGCAATACAAACTTGTGCAACTTCATCGAACTTTTTCCCAAGAATTTTGCCTTCAAAGAAGAACCGCAAGGCGAAATCAGATTTCGGCCTAATGGTTGGTGGAGTTAGACTTCCTGAACTGATGGCAGAGCCAACAAATGTTAGGTCGATGTCATTTGTCGGGACACACGAATATCTTGCTCCTGAGATAATCAAAGGGGAGGGTCATGGTAGTGCAGTAGATTGGTGGACTTATGGTATATTCTTGTATGAACTTTTGCATGGAACAACCCCTTTTAAAGGTGCTGGATATAAGGCCACACTTTTCAATGTTGTAGGACAACCATTAAGGTTCCCCGAAACTCCTCAAGTTAGCGCCGTGGCTCGCGATCTTATACGAGGATTGTTGGTCAAGGAACCTCAGAAAAGGATTGCATATAAAAGAGGTGCAACAGAAATTAAACAACACCCTTTTTTTGAGGGTGTGAATTGGGCTCTAGTTAGAAGTGCTACACCACCTCATATACCAGAAACTATAGACTTTTCAAAGTATGCTAGCAAAGACAAAGATTCAGCAACATCACAAGCTGATAAGAAGATGGAAGATATTGCTAATGATAAGAACAGTAACAGTTCCAATGATTCTTCTTACATAGATTTTGAGTATTTTTAG 1821 0.4053 MPFQIFSNMLHILNFLLRGFCFAHLMTSSKPVKMPDLPQIDLNSRENLKISHSSGHNSCTNSGTNSPTHPTKLNEVAKDGSTNEFSTSEVGSVNLDQVSKTEAKLITKSNRPHKLAPSTRNISDFSTQSPRTKKPSNFDPAITTPGLPTGVAKGMSTHSKNTNQGPGSGASSRSDSLESTSATIRPHTGGDVRWDAINIAARGGTLNLKDFRLLKRIGYGDIGSVYLVELKGTKAHFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSANASNGSSDSGAMLGEEQAIQTCATSSNFFPRILPSKKNRKAKSDFGLMVGGVRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPETIDFSKYASKDKDSATSQADKKMEDIANDKNSNSSNDSSYIDFEYF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1530 606 ProSiteProfiles Protein kinase domain profile. 211 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1530 606 MobiDBLite consensus disorder prediction 589 606 - -
Lal1g1530 606 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 82 606 - -
Lal1g1530 606 PANTHER FLIPPASE KINASE 1-RELATED 82 606 - -
Lal1g1530 606 Gene3D Transferase(Phosphotransferase) domain 1 417 560 - -
Lal1g1530 606 MobiDBLite consensus disorder prediction 569 606 - -
Lal1g1530 606 MobiDBLite consensus disorder prediction 154 186 - -
Lal1g1530 606 CDD STKc_phototropin_like 209 563 - -
Lal1g1530 606 ProSiteProfiles AGC-kinase C-terminal domain profile. 543 606 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal1g1530 606 MobiDBLite consensus disorder prediction 50 76 - -
Lal1g1530 606 MobiDBLite consensus disorder prediction 106 186 - -
Lal1g1530 606 Gene3D Transferase(Phosphotransferase) domain 1 295 366 - -
Lal1g1530 606 SUPERFAMILY Protein kinase-like (PK-like) 208 569 IPR011009 -
Lal1g1530 606 SMART serkin_6 211 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1530 606 MobiDBLite consensus disorder prediction 569 588 - -
Lal1g1530 606 Gene3D Phosphorylase Kinase; domain 1 208 294 - -
Lal1g1530 606 Pfam Protein kinase domain 429 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1530 606 Pfam Protein kinase domain 212 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1530 606 MobiDBLite consensus disorder prediction 112 143 - -
Lal1g1530 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1530 Lal-Chr1 17484496 17488151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1530 177 606 AGC Kinase Gene Family AT1G79250 73.602 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal1g1530 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1530 - - gmx:100819001 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1530 1 17484496 17488151 Lal1g1530 1 17484496 17488151 ECH
Lal11g1564 11 18687896 18690452 Lal1g1530 1 17484496 17488151 LSH
Lal1g1530 1 17484496 17488151 Lal9g0608 9 4122498 4124734 PCT