Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1523 ATGCCCATCTTCATCTCCGACGAAGAGCTCTCCCAGTTCTCCGGCGATGCCGCCACCGTCGCCGCGAAGGCCGACGCCTTCATCCGCGGCCTCCTCCACGACCTAGATACTGTTCGCGCTAGGGCCGATGCCGCCGATATCAACGCCGAGCAGAACTGCTCCCTCATCGAGCAGAAGTATATCTCCCTCGCCGCCGATTTCTCCAAGTTTAAGTCTCAGGTTTCTGAACTCCAATCCTCCCTTGATCAAAGCCAACGTGAACTTGCCGAAGCGGAGTCTCAGAATCACCAAGTTAAATTGCAATTGGTTGAGAAGGATAGGGAGATAGAGAGGTTGAGGACAGAGGTGGCCGAACTTCACAAGTCAAAGAGGCAGTTGATTGAGTTGAATGGGCAGAAGGATTTGGAGCTTAGCGAGAAGAATGCAACCATCAAGAGCTATCTTGATAAGATTGTCCACTTGACTGAAAATGCTGCTAAAAAAGAGGCCCATTTGAGTGAAGTTGAGGCTGAGTTGGGGCGTTCACAAGCTGCTTGTACTCGATTCCAGCAGGAGAAGGAGATTCTCGAGAGGCAGAATTCTTGGCTTGATGATGAATTGACGGGTAAAGTTAACAGTTTCTTTGAGCTGCGCCGAAAACACACAGAGTTGGATGCTGATATGTCTTCTAGGCTTTCAAACGTAGAGAGACAATTTAGTGAATGCTCTAAATCTCTACAATGGAATAAGGATAGAGTGAGGGAGCTAGAAGTGAGCCTTAAATCGACACAAGAGGAATTAATTTCTGTTAAAGATGCTGCTGCCACCAATGAAGAGCGATTATCTGCTGAGCTCTCCACTGTTAATAAGCTAAATGAGTTATATAAAGAAAGTTCTGAGGAATGGTCAAGAAAAGCAGCAGATCTAGAGGGTGTGATAAAAGCGTTGGAGTCACACCTAAAGCAAGTTGAAGATGCTTATAAAGAGGAGCTTGAGAAGGAATTATCTGCTAGAAAACAGGTTGAAAAGGAGGCTGCTAGTTTGAAAGAAAAGCTTGAGAAGTGTGAAGCTGAAATTGAAACAAGGAAAAAGACGAACGAGTCTAATAATCTTTCAGTCACCAGTTTTACTGCTGAACCGTGGTTTGCATCAATTGAAGTTGATAATATGATAGACAAAAATAACTTGCTAGTCCCAAAAATTCCTGTTGGTATTTCTGGAACCGCATTAGCTGCTTCACTTCTGCGAGATGGATGGAGTATGAATATTCTCATTGTCTTCTTCTATTTCCTGAAGTTGGCCAAAATGTATGCAAAATACCAAGAGGCTGTTGATGCATTGAGGCACGAACAATTGGGCAGGAAGGAGTCAGAGGCAATTTTGCAACGGGTTCTGTATGAGTTAGAGGAAAAAGCAGAAGCCATTATCGATGAAAGAGCGGAACATGAAAAGATGGCTGATGCATACTCGTTGATGAACCAGAAATTGCAGAACTCTCTCACCAAGAACACGTATTTAGAGAAAACCATCCAGGAACTGAAGGCTGACCTGAAAAGGCGTGAACGTGATTATAATCTTGCTCAGAAAGAAATTAATGACCTTCAAAAACAGGTGACTGTACTTTTGAAGGAATGCCAAGACATACAACTTCGAGGTGGGTCAATTGGGTATGGTATTGTTGATGATACTGCCAATATTAATTCAACAAATACAGAGACTGAAGTTGAAAAAGTCATCTCAGAGCACCTTTTAACTTTCAATGGCATTAATGGACTAGTTGAGCAGAATAACCAACTTAGAAGCCTTGTACGTAGTCTTTCTGTCCAGATTGAAATTCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAGCTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGAGGCAGTTCTGCAGAGAGCCGAAGAACAAGGGCATATGATTGAATCCCTTCACACATCTGTTGCAATGTACAAAAGGTTGTATGAGGAGGAGCATAGTAATAATTTATCTCATACCCATTCTTCAGAAGCACTTGCAGCTGTCACAGAGGTTGGTAGAAATAACCTCAAGGCTTCGATTGAAAGTTCACAGGAAGCTGCTAGGAAGTCTCTGGAAAAAGCTGGAGAGCGCGTAAGATGCCTGGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTGCATTACGATCAGAACGAGACAAGATGGCACTTGAAGCAAATTTCGCTAGAGAGAGACTTGATAGCTTCATGAAAGAATTTGAACACCAGAAAGCCGAAGTCAATGGTGTTTTAGCTAGAAATGTGGAATTTTCTCAGCTCATTGTTGATTACCAACAAAAACTGCGTGGAAGTTCTGAGTTGCTGAGTGCTGCCGAGGAGCGTTGTCGGAAACATTCTATGGAGTTGTCTGTTTTAAAGAATGAAAAGGAAGTCTTATCAAATGCTGAAAAGAGAGCATCTGACGAGGTTCATAGTTTATCTGAAAGGGTGCAGCGCTTGCAGGCTAGTTTGAGTACCATACAAAGTGCTGAAGAAGTTCGAGAGGAAGCAAGAGCTGCAGAGAGGGCAAAACATGAAGAATATGTAAAGAAGTTGGAGAGGGAATGGGCTGAAGCTAAGAAAGAGTTGCTGGAAGAGCGGGAAAATATGCGGGGACTCTCCCTAGACCGTGACCAGACATTGAAAAATTATCTGAGACAGGTTGAGGATATGAGCAAAGAGTTAGCTAGTGCTTTGCGTGCAGTCGCATCTGCTGAATCTAGAGCTGTTGCAGCTGAGGCCAAACTCTCCAGTGTTCAAAGAAAAATGGGTTCCACCGATGATAAGGTTGTTGAAATGGATGGCGTGAGTGGACCTTCCACTTTTTCCAGTGATGAGGTTGTTTCTGAATTGCAAGCTGCCAAGGAGGAGATAGAAAAATTGAAAGAGGAAGCACATGCTAACAAAGCTCACATGCTTCAGTATAAAGGCATTGCTGAGGTGAATGAAGATGCACTGAAACAGATCGAAGTTGCACACGAGAACTATAAGACGGAGTCTGACATTGTAAAGAAAGCATTAGAAGCTGAACTTCATTCACTTAAAGAGAAGGTCTCAGAGCTTGAAAGTGAGTCTAGTTTAAAATCTGAAGCAGTGGCTTCTGCAACTGCTGGAAAGGAAGAGGCTCTGGCATCTGCTTTGGCTGAAATTACAAATCTAAAAGAAGAAATTTTATCCAAATCTTCTCAAATTTCAGCTATGGAAATTCAGATCTCTGCTTTAAAAGAGCAACTGGACAAGGAACATCAGAGGTGGCGTGCAGCTCAAACAAATTACGAAAGACAGGTTATTCTACAATCTGAAACAATTCAGGAGTTGACAAAAACATCTGAAGCTCGAGCCTTACTGCAGGAGGAGGCATCTGAATTACGTAAGTTAGCTGATGCTCAGAAAATTGAAAATAGTGAACTAAAGGCTAAGTGGGAAGAGGAGAAGGTAGCACTGGAGAAGTCTAGGAGTGATGCTGAAAAGAAATACAATGAAATCAATGAACAGAATAAAATACTGCATAGCCAACTTGAAGCTTTGCACATTCGGTGGGCTGAGAAGGAGCGTAACTATGCCGGTGTTTCATCTGGAAGTAGTAGTGCTGATTTACTTGGTGATGCCAGTCTTCAGAATGTGATTAATTATCTTCGACGTTCGAAGGAAATTGCAGACACAGAAGTTTCATTGTTAAAACAGGAAAAGCTGCGATTACAGTCACAGCTTGAGAGTGCTCTGAAGGCAGCAGAGTCTGCCCATGCATCACTAGAAGCTGAGCGTGCAAAATCAAAATCATTTTTGTTCACTGAAGAAGAGTTCAAAGTATTGCAGCTCCAGGTTCGAGAAATGAATTTACTTCGTGAGAGCAATATGCAACTCAGGGAAGAAAATAAGCACAATTTTGAGGAGTGGCAGAAATCACATGAATTAGCACAAAAGGCAAGAGCTGAGACAGAGAATCTTGAGAATCTTCTGAGGCAAAGAGAAATTGAGCTGGAAGGTCATAAGAATGAAATAGAAGCACTAAAAATTGAAAAAGACCATCTTAATCACAAGGTTTCTGAGTTGATCGAAAGGAGTAAAAATGTTGATGTGGAGGATTATGATCGAGTGAAAAAACTTGTTAGAGATTTGCAGGATAAACTAAGAGATAGGGATACTCAGATAGAGGAAATTGGTAAAATTGTCTTGGAGAAGCAAGATTCAGTTTCCCAGCTAGAGCAAGACCTATCAAACTGTAGATTGGAACTTACTGAGAGAGATAAGAGAATTGACGATATTGCGCATGTTGAGGCTAACCTAAAACTGGAAGCCGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAAGAGGACGGATGTTTTGTCAAGGGAAAAGGAAGAACTAGGGAAAGAGAATCAGCAACTAGCTAGGCAGTTGGATGAAATCAAACAAGCGAAAAGGTCAACAAGTGATACAACTGGTGAACAAGCAATAAAGGAGGAAAAGGATACCAGAATACAGATTCTGGAAAAACATCTGCAGCTACTGAGAGATGAGTTGAAGAAAGAGAAAGAAGACAATCGCGTCGAGCGAAGCAGACGACTGAAGACTGAAAAGGCTATAAAGGACTCTTACAACAATGTTGAGCAGGAAAAAACAAAGTTTGTTAATGATCTTGAGAGACATAAGGAGGCTTTGAAACGGTTATCCGACGAAGTTGAAAAGCTTAAGATTGATCTTAGCAATCTTCCTGAGGGAACAAATGCGGCTCAACTCCTTTCTGGATCCAGTGTTGATGACTTTGTTGCTCCATATATATCTGCTGTTGAAAATTTTGAAAAGGAAGCCCAGTCAGTGTTTTCTGAGCTTGGAAGTCATGGAAATCTTGGAGATGCATCAACATTACCGGAAAGTTCAGCACCTGCTAAAGGTTCTCAAGTCAATGTTCAATCCCCTGGCATTACATCCTTAGTGGCCCCTGGAGCAAGTAGTTTACCACCTAAATTGACAGGAGATAGTGAGAGAAGACTTGCATTACCCAGAGCTGGTGTTGAAGCCCGTAAAGCAGGTAGGAGATTGGTGAGGCCTCGTCTAGTGAAGCCTGATGAGCCACAAGGCGACATGGAAATGTCCGATACTGAAGGGCCGGGGGGAAAGCCTGGGCCTTCTGGTGACACAGAAACCCAAAGCAGCATCGCACAATCGTCTCAACCATTAGCTCGTAAACGCATTGCTCCTACCTCCTCTTCTGAGTTACGTGAAGAATCAGCTGCACCTGGTGAGAAGAGCTCTGATGTAGTTGCACCTGTTTTGAAGAAGTTGAAAGAATCAGAGTCTCCAGAAGTATGTGCTGAAGAACAACCTGCTGCAACTCCAGAATCCACTGAAAGTCATCCAGTCGCTGAAGAATCATTTGATGGTGGTGAATTGCCACAAGGCCAAAATGAGGAAGCCGTTGAAGCGCAAAATGAAGATGGTGAGATTGATGTAGAGAAGGATGAGGAATCAAAAGATCCACAGCGCATGGATGATACTAGTCTAGAGGAATTACAAGGTGACAAGACCGGCATTTTAGAGGAGAATCTAGACCAACCAGCTGAAACAAAAGTGGTGACTAATGATGTTCAAGGGGATCACAGCGAGCCAGACAACCAACAGTTAACATCGGCACCAGGTAGTGACAGAGAAGAGGGAAAATTGTTAATAGACAGTGGAGATCTTGCAGGTGGTAGTGATTTATCTAACATTGCAGAAAACCAAGAATCCCGTGAAGGTCTATCAGAGCCTGTTGCAAGTCCCGAACCTTCCCCGGCGAGAGTTGATGATGATGCTCTAGAGGCTGGTGAGATTGATTCTCCCCAACATTCAAGTGATGATAAGAATGATGAGGGTGACATGGTTGTGGAATCTGTTGATGTTACTGATCCAATAGTAGTTGAAAGTGAGCATGTTGCTGACCCTGCACTTGTTTCAAACGAGAGCAGTTTGACAGTTAGTGCTGCAGAAACTAGTTCCTCAAAAACGAATTTGCCTGTTCCAAAGCAAGGGACTAGCGTTGAAACGGATGATACAAAGCAGCAGGAATCACCTAGTATGTCAACAACCATTAACTTGTCGGAAAGAGCCCGACAGAGAGCTCAGTTGAGACAGGCTGGCGTGGTTTCTACCATCGGTAGAGGTCGTGGAAGAGCATCTCCCCGTGGTCGAGTTCTACGTGGCCGAGGTGCTCGAGGCGGACATAGAATGCCACCATCTGGTGATGCCTGA 6261 0.4322 MPIFISDEELSQFSGDAATVAAKADAFIRGLLHDLDTVRARADAADINAEQNCSLIEQKYISLAADFSKFKSQVSELQSSLDQSQRELAEAESQNHQVKLQLVEKDREIERLRTEVAELHKSKRQLIELNGQKDLELSEKNATIKSYLDKIVHLTENAAKKEAHLSEVEAELGRSQAACTRFQQEKEILERQNSWLDDELTGKVNSFFELRRKHTELDADMSSRLSNVERQFSECSKSLQWNKDRVRELEVSLKSTQEELISVKDAAATNEERLSAELSTVNKLNELYKESSEEWSRKAADLEGVIKALESHLKQVEDAYKEELEKELSARKQVEKEAASLKEKLEKCEAEIETRKKTNESNNLSVTSFTAEPWFASIEVDNMIDKNNLLVPKIPVGISGTALAASLLRDGWSMNILIVFFYFLKLAKMYAKYQEAVDALRHEQLGRKESEAILQRVLYELEEKAEAIIDERAEHEKMADAYSLMNQKLQNSLTKNTYLEKTIQELKADLKRRERDYNLAQKEINDLQKQVTVLLKECQDIQLRGGSIGYGIVDDTANINSTNTETEVEKVISEHLLTFNGINGLVEQNNQLRSLVRSLSVQIEIQEVEFKEKLEMELKKHTEEAASKVEAVLQRAEEQGHMIESLHTSVAMYKRLYEEEHSNNLSHTHSSEALAAVTEVGRNNLKASIESSQEAARKSLEKAGERVRCLEDDLAKSRSEIIALRSERDKMALEANFARERLDSFMKEFEHQKAEVNGVLARNVEFSQLIVDYQQKLRGSSELLSAAEERCRKHSMELSVLKNEKEVLSNAEKRASDEVHSLSERVQRLQASLSTIQSAEEVREEARAAERAKHEEYVKKLEREWAEAKKELLEERENMRGLSLDRDQTLKNYLRQVEDMSKELASALRAVASAESRAVAAEAKLSSVQRKMGSTDDKVVEMDGVSGPSTFSSDEVVSELQAAKEEIEKLKEEAHANKAHMLQYKGIAEVNEDALKQIEVAHENYKTESDIVKKALEAELHSLKEKVSELESESSLKSEAVASATAGKEEALASALAEITNLKEEILSKSSQISAMEIQISALKEQLDKEHQRWRAAQTNYERQVILQSETIQELTKTSEARALLQEEASELRKLADAQKIENSELKAKWEEEKVALEKSRSDAEKKYNEINEQNKILHSQLEALHIRWAEKERNYAGVSSGSSSADLLGDASLQNVINYLRRSKEIADTEVSLLKQEKLRLQSQLESALKAAESAHASLEAERAKSKSFLFTEEEFKVLQLQVREMNLLRESNMQLREENKHNFEEWQKSHELAQKARAETENLENLLRQREIELEGHKNEIEALKIEKDHLNHKVSELIERSKNVDVEDYDRVKKLVRDLQDKLRDRDTQIEEIGKIVLEKQDSVSQLEQDLSNCRLELTERDKRIDDIAHVEANLKLEAEKHRKLLAQFKKRTDVLSREKEELGKENQQLARQLDEIKQAKRSTSDTTGEQAIKEEKDTRIQILEKHLQLLRDELKKEKEDNRVERSRRLKTEKAIKDSYNNVEQEKTKFVNDLERHKEALKRLSDEVEKLKIDLSNLPEGTNAAQLLSGSSVDDFVAPYISAVENFEKEAQSVFSELGSHGNLGDASTLPESSAPAKGSQVNVQSPGITSLVAPGASSLPPKLTGDSERRLALPRAGVEARKAGRRLVRPRLVKPDEPQGDMEMSDTEGPGGKPGPSGDTETQSSIAQSSQPLARKRIAPTSSSELREESAAPGEKSSDVVAPVLKKLKESESPEVCAEEQPAATPESTESHPVAEESFDGGELPQGQNEEAVEAQNEDGEIDVEKDEESKDPQRMDDTSLEELQGDKTGILEENLDQPAETKVVTNDVQGDHSEPDNQQLTSAPGSDREEGKLLIDSGDLAGGSDLSNIAENQESREGLSEPVASPEPSPARVDDDALEAGEIDSPQHSSDDKNDEGDMVVESVDVTDPIVVESEHVADPALVSNESSLTVSAAETSSSKTNLPVPKQGTSVETDDTKQQESPSMSTTINLSERARQRAQLRQAGVVSTIGRGRGRASPRGRVLRGRGARGGHRMPPSGDA 2086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1523 2086 Pfam TPR/MLP1/MLP2-like protein 1058 1185 IPR012929 GO:0006606
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1721 1752 - -
Lal1g1523 2086 Coils Coil 1280 1300 - -
Lal1g1523 2086 Coils Coil 458 478 - -
Lal1g1523 2086 Coils Coil 151 171 - -
Lal1g1523 2086 Coils Coil 611 639 - -
Lal1g1523 2086 Coils Coil 693 727 - -
Lal1g1523 2086 Coils Coil 1497 1531 - -
Lal1g1523 2086 Coils Coil 1232 1263 - -
Lal1g1523 2086 Coils Coil 890 931 - -
Lal1g1523 2086 Coils Coil 1045 1065 - -
Lal1g1523 2086 Coils Coil 1013 1033 - -
Lal1g1523 2086 Coils Coil 1311 1363 - -
Lal1g1523 2086 Coils Coil 496 544 - -
Lal1g1523 2086 Coils Coil 1435 1490 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1463 1497 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1672 1705 - -
Lal1g1523 2086 Coils Coil 246 266 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1766 1780 - -
Lal1g1523 2086 Coils Coil 1073 1104 - -
Lal1g1523 2086 Coils Coil 953 980 - -
Lal1g1523 2086 Coils Coil 1543 1577 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1621 2086 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1937 1965 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1986 2042 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1864 1890 - -
Lal1g1523 2086 PANTHER NUCLEOPROTEIN TPR 1 2061 - -
Lal1g1523 2086 Coils Coil 67 129 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1621 1656 - -
Lal1g1523 2086 Coils Coil 851 878 - -
Lal1g1523 2086 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2061 - -
Lal1g1523 2086 Coils Coil 1115 1181 - -
Lal1g1523 2086 Coils Coil 770 832 - -
Lal1g1523 2086 Coils Coil 299 358 - -
Lal1g1523 2086 MobiDBLite consensus disorder prediction 1831 1854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1523 Lal-Chr1 17383219 17409794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1523 K09291 - gmx:100811882 2891.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1523 1 17383219 17409794 Lal1g1523 1 17383219 17409794 ECH
Lal20g0523 20 4502994 4541805 Lal1g1523 1 17383219 17409794 LSH