Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1515 ATGGACCTCACTCCGCCGCCAATTGAGGATGGTTTCACGGCGGAGAAGCTTTTCAACCAGGGTTTCTCCTACACCTACGACGACGTTATCTTCCTCCCTCACTACATCGACTTCCCCTCCGACGCCGTCAACCTCTCCACTAACCTCTCCCGCAACCTCCGCCTCTCCGTCCCTCTCGTCGCTTCCCCCATGGACACCGTCTCAGAATCAGCCATGGCCGCCGCCATGGCTTCCCTCGGCGGCATCGCCATCATCCACTCTAATACCACCGCCGCCGTCCAAGCCTCCCTCGTCCGCGCGGCTAAGTCCCGACGCGTCCCCATCCTCCATGACCCTGTCTTCCTCCCTCCCTCCGCCGAGATCATCTCCATCGACGACTTCGCTGACTCGCCGTTCATCCTCGTGACCGAGTCTGGAGACTCAAAATCCAACCTCCTCGGGTATGTCTCGAGGGAGAATTGGACTAACTTGAAAACGAATCAAAGCGACAAGGGCTATAGAGTTCGCGATTATTTAGTTGAATCACCGGTTACTGTGCCATGGAGTTATGATTTGGCGAAAATCGATGAAACGTTGAATGAGAAGAAAGCAAAATTTGTTGGTTTGGTGAGTGATGACAGTGAATTGGTGGATTTTGTGTCAAGGGAGGATGTGGAAAGGGTTAAAGGTTATCCGAAATTGTTGGCCAAGGGATCCGTGGGGGCGAACGGGGAATGGATGGTGGGGGCCGCGATCGGGACGAGGGAAGAAGATAAGGAGAGGTTGGAGCAATTGGTGAAGGCTGGAGTGAATGTGGTTGTGCTTGATAGTTCTCAGGGTAACTCTATTTATCAGTTGGAGATGATCAAGTATGTGAAGAAAGTGTACCCGGAGATAGATGTGATTGGTGGGAATGTGGTGACAATGTATCAGGCTGAGAATTTGATTCAGGCCGGTGTTGATGGGTTGAGGGTTGGTATGGGGTCTGGTTCTATATGCACTACACAAGAGGTGTGTGCGGTTGGACGTGGTCAGGCAACTGCCGTTTACAAGGTCTCATCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCAAACTCGGGTCATATTGTTAAGGCTTTGTCATTGGGAGCATCTACTGTTATGATGGGAAGCTTCTTAGCTGGTAGCACCGAGGCTCCTGGAGCTTATGAATATCAGAATGGTCAACGCGTCAAAAAGTATAGAGGGATGGGTTCCCTGGAAGCTATGACTAAAGGAAGTGATCAAAGGTACTTGGGTGATACAACAAAGCTAAAAATTGCTCAGGGGGTTGTTGGAGCTGTGAAAGATAAGGGTTCTGTCTTGAAGTTCATACCATACACTTTGCAAGCAGTAAAACAAGGGTTTCAAGATATTGGAGCCAACTCTTTGCAATCTGCTCACGACCTTTTAAGATCTAGGGTGTTAAGGCTAGAGGTTCGGACTGGAGCAGCACAAGTTGAAGGTGGAATTCATGGGCTGGTTTCATATGAAAAGAAGTATTATTGA 1524 0.4961 MDLTPPPIEDGFTAEKLFNQGFSYTYDDVIFLPHYIDFPSDAVNLSTNLSRNLRLSVPLVASPMDTVSESAMAAAMASLGGIAIIHSNTTAAVQASLVRAAKSRRVPILHDPVFLPPSAEIISIDDFADSPFILVTESGDSKSNLLGYVSRENWTNLKTNQSDKGYRVRDYLVESPVTVPWSYDLAKIDETLNEKKAKFVGLVSDDSELVDFVSREDVERVKGYPKLLAKGSVGANGEWMVGAAIGTREEDKERLEQLVKAGVNVVVLDSSQGNSIYQLEMIKYVKKVYPEIDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSTEAPGAYEYQNGQRVKKYRGMGSLEAMTKGSDQRYLGDTTKLKIAQGVVGAVKDKGSVLKFIPYTLQAVKQGFQDIGANSLQSAHDLLRSRVLRLEVRTGAAQVEGGIHGLVSYEKKYY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1515 507 PIRSF IMPDH 11 507 IPR005990 GO:0003938|GO:0006164
Lal1g1515 507 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 7 506 - -
Lal1g1515 507 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 7 506 IPR005990 GO:0003938|GO:0006164
Lal1g1515 507 SMART IMPDH_2 22 497 - -
Lal1g1515 507 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 473 IPR005990 GO:0003938|GO:0006164
Lal1g1515 507 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 505 IPR005990 GO:0003938|GO:0006164
Lal1g1515 507 CDD IMPDH 23 477 IPR001093 GO:0003824
Lal1g1515 507 SUPERFAMILY CBS-domain pair 130 220 IPR046342 -
Lal1g1515 507 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 316 328 IPR015875 GO:0016491
Lal1g1515 507 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 13 507 - -
Lal1g1515 507 Pfam IMP dehydrogenase / GMP reductase domain 24 497 IPR001093 GO:0003824
Lal1g1515 507 Gene3D Aldolase class I 11 507 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1515 Lal-Chr1 17290962 17295073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1515 K00088 - gmx:547628 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1515 1 17290962 17295073 Lal1g1515 1 17290962 17295073 ECH
Lal20g0507 20 4326809 4330800 Lal1g1515 1 17290962 17295073 LSH
Lal11g1547 11 18576061 18580197 Lal1g1515 1 17290962 17295073 LSH