Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1510 ATGACATCTCAAGAAAGTGATAGTTGGGCAATAGAACTTGTTAGTGATTTTGATGTTACATCTAATGACCATGATATTCAAGAGCTACAAAGTGAACATTTGGGTCATGCTAAAAACACCAATGACTCAACTCCTTACATAGGGCAAATATTTAAGTGTGAAGAAAATGCATACAACTTTTATTGTTTATTTGCGAAGAAATGTGGTTTTTCAATTAGAAGAGGTCATTGTTACAAATGTAATGAGAATAACACTGAGTATATTTATAGAAGAGAGTTCATTTGTCATCGAGCTGGTATTGTCAACCAACAAAAAGTTAACGAAGTAGAAAAACATAGGAAACGAAAAAGTTCAAGATGCAATTGTACTGCAAAAATTGTCGAACAACATTGGGTGGTTACATATTTTAGTAATTCTCATAACCATGCATTGTTGGATGATAAAGAAGTTCGTTTTCTTCCTGCTTATTGTGACATACCTAGCAATGATCAAAGTCGTATATTACTGTTATCTAAAGCTGGTTGCTCAATAAGTATTATAATGAGAGTGCTTGAATTGGAAAATGGAATAGAGGCAGGCCGTTTGCCATATTTGGAGAAAGATATAAGAAATGTTTTGCAATCCCAAAGTAGTGTTGGTAATGATAATGATGCTTCAAACGTATTCGGTGATTCGGTTCGAGCATATGAAGCTTTTGGAGATGTGGTTGTCTTTGATACTACATATTGA 729 0.3374 MTSQESDSWAIELVSDFDVTSNDHDIQELQSEHLGHAKNTNDSTPYIGQIFKCEENAYNFYCLFAKKCGFSIRRGHCYKCNENNTEYIYRREFICHRAGIVNQQKVNEVEKHRKRKSSRCNCTAKIVEQHWVVTYFSNSHNHALLDDKEVRFLPAYCDIPSNDQSRILLLSKAGCSISIIMRVLELENGIEAGRLPYLEKDIRNVLQSQSSVGNDNDASNVFGDSVRAYEAFGDVVVFDTTY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1510 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 241 IPR031052 GO:0006355
Lal1g1510 242 Pfam FAR1 DNA-binding domain 59 145 IPR004330 -
Lal1g1510 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 20 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1510 Lal-Chr1 17198440 17199264 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal1g1510 FAR1 3.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1510 - - var:108339217 280.026