Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1507 ATGGAACAATCAAGATTCCAAAGAACACTCCCATTCAACAGCATGGAACCTGGAAGCGAAAAGTTCCAGCCCGGATCACAGTCAGTAATGCAAGACCATCTGGATGCCATGCATGCTAGTAGAAGACAGCCTGACCTCAGTACATCAGAAGCTAAACCTGTACTTAATTACTCCATGAACACAGGTGAGGAATTTGCACTCGAATTTTTGAGAGATAGGGTGAATCTCAGGAAGCCGGTGTTTTCGAATGTTGGCGATACCAATTATACGACGGGTTATATGGACCTTAAAGGCATTTTAGGCATTGGTCATCCAGGATCTGAAAGTGGATCAGACATTTCTATGCTCTCAATGGTCGATAAATATCCAAAAGAGTATGATAGAATGAATGTACCCTTACATGGCGACAGAAGCAATTATGGGTCTATTCGAGCAATACCAGAATCTTCATTGGATCATGACAATAGACAATATGTGCATGGGTATGGTTCTTCTCGAGGTTATGATAGCTTATCAACAATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCCTGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTGTTGATCTATAGTCAGGTTCATGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCCGTATCATCTGATGAGGATTTACAGAATATGATGGAGGAATGCAATCCTCTAGAAGATAGAGAAGGATCACAAAAGCTTCGCATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAGTTCGGTCTTGGCAGCGTGGGTGATGATTCTGAAATCCAGTATGTTGTTGCCATTAATGGCATGGACTTGGGGTCAAGGAAAAACTCAACCATATTTGGCGTCAGTTCTTCAGCAAATGATATCCATGAGTTAGACAGGCAAACTATTGAGAGGGAGACAAGTAGAGTTGCTGTGGAATCTATAGGTGTTAACAATGCTCCCCCGACTAACAAATTTGACTCATCATTCAATACTCAGGCTTCGCAACCAGTGCTACCAACTTCCTCAAATTCCTACGAAACCTATCCACTTTTTTATGGTGACCAAATGATGCACCATGGGGATCCTGGTAGTCAATATCTTATTAATCAGGGCTTTAATCCTTCTCATATACCTGTTATTGGAGAGATTCCTTATACAATGGCTCCTCGTATGCCGATTAATCAACAAGGGATTTTACATGAGGGCTATCCACATTCTGGTTTACAAATGCAAAATTCAGAAATACCAGCAATGCTGGCTAAAAAGGTGGAGGATAGTTCAATTCAACAAGGAGGTGACCCTGGGAAAGTTGTATCCTTCGAAACATCGTCCCCAGTTCCTGCACAATTGTTTGATGATTACCATAAAAATAATTTTCCTGAAGCATCAGTTGTAGTTACTGTGCTAGAGGGGCATTCAATGCCTCCAACGAAAAAGGACCAGCTTCATGATTATGAAGACGCTTCTTCCACATCTAGCAGTGCATTAGGTCCTGCTTATGTTGATTCCCAATCCAATGCAGTTGACTTGAGTTCTCTTCACCCTCCCCCTCTTCCCAAAAGGGTTTACTATTCAGAGAGAATTCCCAGGGAGCAAGTAGAGTTTTTGAATCGATCCTCGAAGTCAGATGATGCACATAATTCGCAGATTCATGTTTCAGATCTAATTTCTGATGTCAACCTGCCGGATTCAGTTAGAGAATTTGGTGACAACTTGCAAGTCGGAAATATGTCTAATCTAGCTGAGGAATCGAGCATCACAACCAAGCCCTTGCACACAGATGGCTATGCCGTCGAGAATGGGGCTATCAAAAATCAGATAGACCAAGAGTTGCCTGATGCTAGCAATCCGGTGAAGTCAAAGCCTATCGAGCATTTGTATCCCGAGTTGAAGCAGGTATTATCAAACAATGCACACAGTAATGATGTCATAAATAAGGATAATGCTGTTAGTTTGGAAACTGAAATTTATAGTAAAAATAATCATAATAAACTAGTGCTTGATGAGTCAAAAGACGGAAAATCAGAGTTTCCTACTTCACACCAGGTTCCCTCTGTTAAGCACCATGATGATCCAGCATGCAATCTTCCAGAAATTGATTGGGGTGATACTGCTGTGATGGAATCTAATGACTATTATAGTGTACAAGCACTACCTGATACTTTAAATGGGAACACAACTATGAAAGATGATTCACAAGATTTTCCTTCAAATGTTGTTTCCAAAGAGGCGCAGGGTGACATTCTTATTGATATCAATGATCGGTTTCCGCGTCAATTGCTCAGTGATATATTCTCTAAAGCAATACTTGAAGAAGACCCCTCTAGTCTGCATCCATTAACCTCAGATGGAGTAGGTCTAAGTGTAAACATGGAAAATCATGACCCTAAGCGATGGTCGTATTTTCAAAGATTGGCACAAGGGCTCGATAATGTCTCTCTTATTGACCAGGATCATCCTGGTTTTTCACCCACACTACGAGAAGTAGAAGATAATAGAACTCAACATGTCACACCTCTAACAACTGATGAAGAAAATCAGAAAGGTTTGTATGGAAGGAATGGGACAGAAACCATTGCTCTGAAGTCAAATTATGATCAATCCGAAGTGAAGGACACTGAAAGTATGCAATTTGAAGCTATGATCGAAAATGTAAGAGCACAGGAGTCAGAATATGAGAATCTGCATAAATATCCTGATCTGCTGACAAAGGATGGGAATTTCGAAACAAGAAATAATGGTGTACCTCCAGTTGATCCTTCTTTAGGAGAATTTGATATGAGTACCTTGCAGGTCATTATGAATGAAGATCTTGAAGAGCTGAGGGAACTGGGTTCTGGCACCTTTGGGACTGTGTATCACGGAAAATGGCGAGGAACCGACGTTGCTATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACCGTAGAATTCTGGCGGGAAGCAGATATTCTTTCCAAGCTTCATCACCCGAATGTGGTTGCATTTTATGGTGTGGTGCAGAATGGACCGGGAGGAACAATGGCCACTGTTACGGAATTCATGGTCGATGGTTCTCTTAGGCATGTTTTACTTCGCAAGGACAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGGATGGAATATTTACACTCAAAAAACATAGTGCATTTTGACTTAAAATGCGACAATTTGCTCGTGAACTTAAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTCGGCCTGTCAAAAATTAAACGGAATACCTTGGTTTCTGGCGGTGTGCGAGGGACTTTACCTTGGATGGCACCGGAGTTGCTAAATGGTAGCAGCAATAAGGTCTCAGAGAAGGTTGATGTGTTCTCTTTCGGCATTGTATTGTGGGAAATTCTCACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAACAACACTTTAAGGCCAACAATCCCGAGTTACTGTGATCATGAATGGAGAACACTAATGGAGGAATGTTGGGCACCCAATCCTTCGGCTAGGCCTTCTTTCACCGAGATTGCCAGTCGATTGCGTGTAATGTCGGCCGCGGCTCTCCCAACAAAAACACAGGGCCACAAGGCTTCTAAATGA 3753 0.4186 MEQSRFQRTLPFNSMEPGSEKFQPGSQSVMQDHLDAMHASRRQPDLSTSEAKPVLNYSMNTGEEFALEFLRDRVNLRKPVFSNVGDTNYTTGYMDLKGILGIGHPGSESGSDISMLSMVDKYPKEYDRMNVPLHGDRSNYGSIRAIPESSLDHDNRQYVHGYGSSRGYDSLSTMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALLIYSQVHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNPLEDREGSQKLRMFLFSMSDLEDAQFGLGSVGDDSEIQYVVAINGMDLGSRKNSTIFGVSSSANDIHELDRQTIERETSRVAVESIGVNNAPPTNKFDSSFNTQASQPVLPTSSNSYETYPLFYGDQMMHHGDPGSQYLINQGFNPSHIPVIGEIPYTMAPRMPINQQGILHEGYPHSGLQMQNSEIPAMLAKKVEDSSIQQGGDPGKVVSFETSSPVPAQLFDDYHKNNFPEASVVVTVLEGHSMPPTKKDQLHDYEDASSTSSSALGPAYVDSQSNAVDLSSLHPPPLPKRVYYSERIPREQVEFLNRSSKSDDAHNSQIHVSDLISDVNLPDSVREFGDNLQVGNMSNLAEESSITTKPLHTDGYAVENGAIKNQIDQELPDASNPVKSKPIEHLYPELKQVLSNNAHSNDVINKDNAVSLETEIYSKNNHNKLVLDESKDGKSEFPTSHQVPSVKHHDDPACNLPEIDWGDTAVMESNDYYSVQALPDTLNGNTTMKDDSQDFPSNVVSKEAQGDILIDINDRFPRQLLSDIFSKAILEEDPSSLHPLTSDGVGLSVNMENHDPKRWSYFQRLAQGLDNVSLIDQDHPGFSPTLREVEDNRTQHVTPLTTDEENQKGLYGRNGTETIALKSNYDQSEVKDTESMQFEAMIENVRAQESEYENLHKYPDLLTKDGNFETRNNGVPPVDPSLGEFDMSTLQVIMNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQNGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDHEWRTLMEECWAPNPSARPSFTEIASRLRVMSAAALPTKTQGHKASK 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1507 1250 CDD STKc_MAP3K-like 974 1231 - -
Lal1g1507 1250 Gene3D Transferase(Phosphotransferase) domain 1 1056 1250 - -
Lal1g1507 1250 MobiDBLite consensus disorder prediction 701 721 - -
Lal1g1507 1250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1093 1105 IPR008271 GO:0004672|GO:0006468
Lal1g1507 1250 MobiDBLite consensus disorder prediction 1 30 - -
Lal1g1507 1250 Pfam Protein tyrosine and serine/threonine kinase 969 1231 IPR001245 GO:0004672|GO:0006468
Lal1g1507 1250 ProSiteProfiles Protein kinase domain profile. 968 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1507 1250 PRINTS Tyrosine kinase catalytic domain signature 1050 1063 IPR001245 GO:0004672|GO:0006468
Lal1g1507 1250 PRINTS Tyrosine kinase catalytic domain signature 1087 1105 IPR001245 GO:0004672|GO:0006468
Lal1g1507 1250 PRINTS Tyrosine kinase catalytic domain signature 1158 1180 IPR001245 GO:0004672|GO:0006468
Lal1g1507 1250 PRINTS Tyrosine kinase catalytic domain signature 1202 1224 IPR001245 GO:0004672|GO:0006468
Lal1g1507 1250 SMART PB1_new 189 276 IPR000270 GO:0005515
Lal1g1507 1250 Gene3D - 193 276 - -
Lal1g1507 1250 Gene3D Phosphorylase Kinase; domain 1 961 1055 - -
Lal1g1507 1250 ProSitePatterns Protein kinases ATP-binding region signature. 974 999 IPR017441 GO:0005524
Lal1g1507 1250 CDD PB1_UP2 178 274 - -
Lal1g1507 1250 SUPERFAMILY Protein kinase-like (PK-like) 958 1230 IPR011009 -
Lal1g1507 1250 SUPERFAMILY CAD & PB1 domains 191 279 - -
Lal1g1507 1250 MobiDBLite consensus disorder prediction 505 529 - -
Lal1g1507 1250 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1250 - -
Lal1g1507 1250 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 86 1250 - -
Lal1g1507 1250 SMART serkin_6 968 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1507 1250 Pfam PB1 domain 191 274 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1507 Lal-Chr1 17176158 17185812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1507 49 583 MAP Kinase Kinase Kinase AT1G16270 40.717 9.95e-104 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal1g1507 PK_Tyr_Ser-Thr 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1507 - - gmx:100799639 1870.9