Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1501 ATGGTTGATCAGGTTCAACACCCTACAATCATGGGGAAGGTTGCTGGGCAGCTCCATCTCCGTTCTGATATTAGGAATTATGATGGAGCTTTCCGCCAGCCTGCTCTCTACCAAAGACGCCAATTCGGGAATTACTCAAATGCTGCATTCAACTATCCAGCGATTCCCACATGCGGAGCCACTACTGATTTGAGTAGTGTTGCAACAACAGCCTCCCCTATCTTTGTTGCTGCTCCAGCAGAGAAAAGCAATTTTCTTATTGACTTTCTCATGGGTGGTGTATCTGCTGCTGTTTCTAAAACTGCTGCTGCTCCCATTGAACGTGTTAAACTGTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGTAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTCAAGCGAACAATGGCGGATGAGGGAGCTATTGCACTGTGGCGAGGTAACACAGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTTAAGAGGCTTTTCAACTTCAAGAAGGACCGGGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCATCTGGTGGTGCTGCTGGTGCCTCATCCCTTTTATTTGTCTACTCCCTTGATTATGCTCGTACCCGTCTTGCTAATGATGCAAAGGCTGCAAAGAAGGGTGGAGGAAGGCAATTCAATGGTCTCGTTGATGTTTACAAGAAGACATTGGCGACTGATGGTGTTGCTGGCCTTTACCGTGGTTTCAACATTTCTTGTGTTGGAATTATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCTTGAAGCCTGTTCTGCTTACTGGAAATTTGCAGGATAGCTTTTTCGCTAGCTTTGGACTTGGGTGGCTCATCACCAATGGTGCAGGTTTAGCATCATACCCCATTGACACTGTAAGAAGAAGAATGATGATGACGTCCGGGGAGGCCGTCAAGTACAAGAGCTCTTTGGATGCATTCACACAGATCCTCAAGAATGAGGGTTTCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTTCGTGCCGTTGCTGGCGCTGGTGTCCTTGCTGGTTACGACAAGTTGCAGGTGGTGTTGTTGGGCAAGAAGTATGGAAGTGGTAGTGGTTAA 1158 0.4646 MVDQVQHPTIMGKVAGQLHLRSDIRNYDGAFRQPALYQRRQFGNYSNAAFNYPAIPTCGATTDLSSVATTASPIFVAAPAEKSNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMADEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGRQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFTQILKNEGFKSLFKGAGANILRAVAGAGVLAGYDKLQVVLLGKKYGSGSG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Lal1g1501 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085
Lal1g1501 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 280 IPR018108 -
Lal1g1501 385 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 384 - -
Lal1g1501 385 Pfam Mitochondrial carrier protein 83 180 IPR018108 -
Lal1g1501 385 Pfam Mitochondrial carrier protein 187 283 IPR018108 -
Lal1g1501 385 Pfam Mitochondrial carrier protein 289 376 IPR018108 -
Lal1g1501 385 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 PRINTS Adenine nucleotide translocator signature 162 174 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 PRINTS Adenine nucleotide translocator signature 188 201 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 Gene3D Mitochondrial carrier domain 86 381 IPR023395 -
Lal1g1501 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 384 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g1501 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
Lal1g1501 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 176 IPR018108 -
Lal1g1501 385 SUPERFAMILY Mitochondrial carrier 82 370 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1501 Lal-Chr1 17048270 17051383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1501 1 383 Antiporters AT5G13490 80.256 0.0 602
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1501 1 17048270 17051383 Lal1g1501 1 17048270 17051383 ECH