Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1408 ATGGTACTTCTTGGGCCGTCTAATCGTATTGGTGGAGCCCAGTCTGTTGTGAGATCGAATTCCGAAATGATAAATAGTCGAGGTGTTGTAATTGGGCCTTCACAAGCTTCCTTTCCATCCCTGGTGTCACCGTGTAATCAGATTAACAACAACATGGACATGTTTGGCGATTTTTCGAATGCTAGTTTTCCGAATTCAGGTCCTGGGAGTAGCCAGCATGGAGGGGTTGATATTGGGGCTGAATTCGATCCGCCCTCTGAAGTTGGCAATGAATTTAGCTTCGTCGATCCTTCATCGTCATCGTTGTTTATGCAATCAAATATGATGAACCCTGGTTCGTCTATTCAAGGTCATGGTCAACAATTTCCGAACCCTTCTGGTAACCAGTTGTTATCGGATCAACAGAATTCTCAACAGCTTGAGTATCAAAATTTCCAACAAAGTCAGCAGCCAATGCAACAGTTCCCTGCTCCTCCAAACAATCAGCAGCAGCAGCAGCATTTTCAATTGATGCGAGGAGCGATAGGTAGTATTGGATCGGTGAAGTTCGAGTCACAGGTTAACAATGATCAATTTGGACAGTATCAGCAGATGCCCTTGTTGAGGAATCTCGCTCCACCGAAATTGGAACCACACCATACGGATCAGCCTTTGTTTACGCATCAAGAACAGCAACAGCTTCTTCACATGGCAGGGCAATCCCCTCAGGCTGCTGCTGCTGCAGCAGCTGCAAATATGAGATTTTTGAATCATCAGAGACATTCGCAATCGCAACAGCCGCAACAATTCTTAAAGACAGTGCCTCAACAACGGTCTCAGCAGTTTCAACAGCAGGATATGCCTATAAGATCTCCTGTGAAACCTGTATATGAGCCTGGGATATGTGCTAATCGGCTGACATATTACATGCATCAGCAACGGAATAGACCGAAGGATAACAGCATTGAATTCTGGAGGACATTTGTTGCTGAGCATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGAAAGTGGCAGGCAAACAGCTGGAGTTTTCCCCCGGGATATACAGCACTGTGCAATATGTAATTGCAGACCTGGTCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGCGGTACATTACAAGAGCTACTTTATGTTGATATGCCTCGCGAGTACCATAATTCCTCTGGTCACACTGTTCTGGATTATGCAAAAGCAATAGAAGAAAGTGTTTTTGAGAAACTTCGAGTTGTTCGTGAAGGTCAACTTCGATTAGTTTTTGCCCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGTTCGGCGCCATGAAGATCTAATCCCCAAAAGATTGTTACTACCTCAGATTAGTCAACTTGGAGCAGCTGCTCAAAAATTCCAGTCTTGTACTCAAGGTGAAACATCCAATTCATCTGTTTCAGAGTTACAAAATAATTGCAATATGTTTCTTGCATCAGCTCATGGGTTGGCGAAAGCTTTAGAAGCTCCATTGGTTAATGAATTAGGATATACAAAGCGATACGTGCGCTGCCTACAGATAGCTGAAGTGGTGAATAGTATGAAAGACTTAATAGATTATAGCACAAATTCAGGGACTGGACCTATGGAGAGCTTAGCAAACTTTACTCGGAGAACAAGTAGTTCATGTGCACTTCGTATTCATGAACAACAGTCTGAAGATCAACCGCAGAAGCGGTCGCGGTTGGAGTCGCAGCCACAGCAACAACAGCCCTCAAATGGTGATCAAAATTCTTCACAAAATGCTTCTAGCAAAGGTTTCACTAGTGCAAATAACACACTCAATTCGGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCACCAGAACTCTATGAATTCTAGACATCAAGGTTCAATGAACAATGTAAGTAGTCCCTATGGGGGTAATTCCTTGAATATTCCACCACCAGGTTGCTCCACTACTGCATTACAGGCACAACTAAGTGCATCTCCTTTTCAACCACCAGCACCATTTTCCTCTAACAATCCACCACAATCATCTGCCAACCCCAGGAGTAGAGCACAATCGCCAGCCGATATTTCTTTGCAACAACAGCAGCCACTGCTTTCTGGTGAAGCCGATGCTAATGAGTTGATGTCTTACCAGATGACCGTCACAGGTGGAATGGCAACTGCTGGTTCTCTTGGAAATGATAACCTGAACGGTAATTCAGGCGTCACGGTCGGTGGTTATGGCAGAAAGGGTACCGGCCCATCTGGTACGGCTGATGGAAATAGACCTGAAATTGGAAATAATTCAGTCATGGATGGAAGCTTAGGAATGGTATCTATTGCTATGGATCAAGCTATGAATAATCTTCAAGAAGATTTGTCAAGCCAACTAGTTACAGGGCTGGGATCAGTAAATGATTTTAATAATCTCCAATTTGATTAG 2463 0.4377 MVLLGPSNRIGGAQSVVRSNSEMINSRGVVIGPSQASFPSLVSPCNQINNNMDMFGDFSNASFPNSGPGSSQHGGVDIGAEFDPPSEVGNEFSFVDPSSSSLFMQSNMMNPGSSIQGHGQQFPNPSGNQLLSDQQNSQQLEYQNFQQSQQPMQQFPAPPNNQQQQQHFQLMRGAIGSIGSVKFESQVNNDQFGQYQQMPLLRNLAPPKLEPHHTDQPLFTHQEQQQLLHMAGQSPQAAAAAAAANMRFLNHQRHSQSQQPQQFLKTVPQQRSQQFQQQDMPIRSPVKPVYEPGICANRLTYYMHQQRNRPKDNSIEFWRTFVAEHFAPNAKKKWCVSMYESGRQTAGVFPRDIQHCAICNCRPGRGFEATAEVLPRLFKIKYESGTLQELLYVDMPREYHNSSGHTVLDYAKAIEESVFEKLRVVREGQLRLVFAPDLKICSWEFCVRRHEDLIPKRLLLPQISQLGAAAQKFQSCTQGETSNSSVSELQNNCNMFLASAHGLAKALEAPLVNELGYTKRYVRCLQIAEVVNSMKDLIDYSTNSGTGPMESLANFTRRTSSSCALRIHEQQSEDQPQKRSRLESQPQQQQPSNGDQNSSQNASSKGFTSANNTLNSASASTTTSTIVGLHQNSMNSRHQGSMNNVSSPYGGNSLNIPPPGCSTTALQAQLSASPFQPPAPFSSNNPPQSSANPRSRAQSPADISLQQQQPLLSGEADANELMSYQMTVTGGMATAGSLGNDNLNGNSGVTVGGYGRKGTGPSGTADGNRPEIGNNSVMDGSLGMVSIAMDQAMNNLQEDLSSQLVTGLGSVNDFNNLQFD 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1408 820 PANTHER LIM DOMAIN-BINDING PROTEIN 730 820 IPR029005 -
Lal1g1408 820 PANTHER LIM DOMAIN-BINDING PROTEIN 217 721 IPR029005 -
Lal1g1408 820 PANTHER LIM DOMAIN-BINDING PROTEIN 1 213 IPR029005 -
Lal1g1408 820 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 217 721 - -
Lal1g1408 820 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 730 820 - -
Lal1g1408 820 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 213 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 634 705 - -
Lal1g1408 820 Pfam LIM-domain binding protein 298 552 IPR029005 -
Lal1g1408 820 MobiDBLite consensus disorder prediction 59 137 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 567 622 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 251 280 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 751 772 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 685 705 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 634 678 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 92 137 - -
Lal1g1408 820 MobiDBLite consensus disorder prediction 581 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1408 Lal-Chr1 16087098 16094922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1408 1 820 C2H2 Transcription Factor Family AT1G43850 46.848 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1408 - - lang:109341232 1083.94