Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1406 ATGAAGACGCTAAATGGATTATTTGGTGCAAGACGGAGAATGTTTCATGGGGTTTTCAATTGCCTTTGTTCCATGCTTGTGTTTTTCTTCTTTTACAATCGTGAGGATATTATTCGAAACCCTCTTCTTAGGCATTCTGCATATTTGGGGAATCATCAAAATGCAATTTTGAGAAATGGGTCTTCTCACATTGCTGTTTTTCACCGTAGAATGATTGGAACTAGCCTCAATACTTCAAGTGTACTTGATGAGCATCGCGACGAAGATGTAGCTGTAAATAATCCCGGGTTTTGTGCTGGATTGCACCACCATGATGGTTATGATAGCCCATGTGAATTCTTAAAGGTTAATCCTCAATGCTCTTCTGAGGGATACATTGATTACTTGAAAGTTTTTTATTGTAAATATCAAAATTTTAGATTACTTGGTTATCTAGTATTTGTTGTGTGTCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCGGCAGACTACTTTTGTCCGTCTCTTGAGCATCTCTCGAAGCTCTTGAAATTGCCTCCAACTGTGGCTGGAGTTGTGCTTCTCCCTCTTGGGAATGGAGCGCCCGATGTGTTTGCCAGTATAGCTGCCTTTGTGGGTACTGAAACGGGTGAAGTGGGTCTTAACAGCGTGTTAGGCGGTGCTCTTTTTGTTACCTGTATTGTTGTTGGAACTGTTTCTTTATGTGTTGCAGACAAGGAGATTCGAATTGATCGAAGATGCTTTATAAGGGATATTAGTTTCTTTATATTCACTCTTGTTGCACTTTTTCTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCAACCATTGCTTTTGTATCAATTTATGTTGTTTATGCGTTCATCGTTGCTGCCAATGAGATATTGCGGAAACATGCACATAGGTTGAAATGGGATGCTGTCACCCCATTGCTTCCGGTCCAAGGAAGTGTGTTTTCTCAAGGTTATGAAGAGGATATTTCTATCTATAGCTCTTTGCTTGACATAGACACCGAGAGTGATCCTCCTCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAACGTAGCAATATATTCAAATCAGGGAAATAAAATCAATTCGGATGAAAGGCCTCCTTGGGGATGGAGTGATGAGAGCGTGGAAAACACGAGGTTGTCATTCTCTGTTTCAAACCTTTTTTTACTGATGGAATTGCCACTGTCAATTCCTAGACGCCTAACCATTCCGATGGTCAATGAGGAAGTATGGTCGAAGCCATATGCTGTAGCCAGTGCTTCATTGTCTCCAATTCTCCTAGCATTTTTGTTTAGCACCCAAAATAATGTGAGTTATCAGAGCACTATCCTTTCTTATTGTATTGGTGTTACTATTGGGTGCACACTTGGTTTTCTTGCATATAAATACACAGTGGCTGATCATCCACCGCATCAGTTTTTGATTCTATGGGTTCTCGGAGGATTCATCATGAGCGTAGTGTGGTTCTACATAATAGCAAATGAGCTCGTGGCTCTATTAGTAGCATTCGGCATAATTTTCAGCATAAGTCCATCCATCCTTGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAACGTTGCATTGGCATTGGATGGAGAAGATGGACTTCAGATTGCTTTATCCGGCTGCTACGCCGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCATTGCTGCTTGGTGCCTGGTCAAAAAAACCCGATCTGTATGTCGTGCCGAAAGACAGTAGCTTGTTTTACACCATGGGATTTCTTATCACAGCACTTCTATGGGCACTTTTTGTTTTACCACGCAACAATATGCATCCTAGCAGAATATTAGGAATGGGTCTCATCACCCTTTATTTGGTGTTTCTTTCATTTAGGGTGTGCACTGCTATGGGACTTGTAACAGTTGCTGGTTTAAGTTGA 1959 0.4155 MKTLNGLFGARRRMFHGVFNCLCSMLVFFFFYNREDIIRNPLLRHSAYLGNHQNAILRNGSSHIAVFHRRMIGTSLNTSSVLDEHRDEDVAVNNPGFCAGLHHHDGYDSPCEFLKVNPQCSSEGYIDYLKVFYCKYQNFRLLGYLVFVVCLAALFYLLGNTAADYFCPSLEHLSKLLKLPPTVAGVVLLPLGNGAPDVFASIAAFVGTETGEVGLNSVLGGALFVTCIVVGTVSLCVADKEIRIDRRCFIRDISFFIFTLVALFLILVVGKVGVGATIAFVSIYVVYAFIVAANEILRKHAHRLKWDAVTPLLPVQGSVFSQGYEEDISIYSSLLDIDTESDPPRLPPSLPQWMWSSNVAIYSNQGNKINSDERPPWGWSDESVENTRLSFSVSNLFLLMELPLSIPRRLTIPMVNEEVWSKPYAVASASLSPILLAFLFSTQNNVSYQSTILSYCIGVTIGCTLGFLAYKYTVADHPPHQFLILWVLGGFIMSVVWFYIIANELVALLVAFGIIFSISPSILGLTVLAWGNSMGDLMSNVALALDGEDGLQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPDLYVVPKDSSLFYTMGFLITALLWALFVLPRNNMHPSRILGMGLITLYLVFLSFRVCTAMGLVTVAGLS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1406 652 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 648 - -
Lal1g1406 652 Pfam Sodium/calcium exchanger protein 487 638 IPR004837 GO:0016021|GO:0055085
Lal1g1406 652 Pfam Sodium/calcium exchanger protein 149 291 IPR004837 GO:0016021|GO:0055085
Lal1g1406 652 Gene3D - 415 640 IPR044880 -
Lal1g1406 652 Gene3D - 179 309 IPR044880 -
Lal1g1406 652 PANTHER CATION/CALCIUM EXCHANGER 4 10 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1406 Lal-Chr1 16050387 16052345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1406 98 644 Antiporters AT5G17850 42.831 3.70e-126 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1406 K13754 - gmx:100796101 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1406 1 16050387 16052345 Lal1g1406 1 16050387 16052345 ECH
Lal20g0964 20 12519770 12521731 Lal1g1406 1 16050387 16052345 LSH