Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1370 ATGGCACGGGGGAGAATAAGGGCAAGGCTCCGGAGGAGCAATCTTTACACATTTGGTTGCCTTCGGCCTTCTACCTCCGAGGAGGAGCCTCATCCTCTTCAAGGTCCTGGCTTTTCGCGAACTGTCCATTGCAACCAGCCTTTGGTCCATGAAAGGAAACCTCTATTTTACTGCAAGAATGATATATCCACGACAAAGTACAATGTTATTACATTTTTGCCCAAAGCGCTTTTTGAACAATTTCGAAGGGTTGCTAATATATACTTCCTTTTAGCTGCGTGCCTCTCAACCTCTTCGATGTCACCTTTCAGCCCGCTTAGCATGATTGCTCCTTTGGCTTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGAAGGTTTGTTCAGGATGTTAAAGTTAATCGCCGGAAAGTTAATCACCATAAGGGCAATGGTGTTTTTGGTCCAAGATCGTGGCAGAACATTATGGTTGGGGATGTGGTAAAAGTAGAAAAGGATCATTTTTTTCCAGCTGATCTGCTTCTCTTGTCATCAAGTTACGAGGACGGGATATGCTATGTGGAGACAATGAATTTAGATGGCGAGACCAACTTGAAGGTGAAAAGATCTTTAGAGGTTACCTTGACTCTAGATAATGATGGAGCCTTTAAGGATTTCACTGGAACAATACGTTGTGAAGATCCAAACTCCAATCTTTACACCTTCGTTGGAAACTTAGAGTATGAACGCCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCTAAGCTCCGTAACACCGACTACATCTATGGGGTGGTCATTTTCACTGGTCATGATAGCAAAGTCATGCAAAATTCCACAAGATCCCCTTCAAAAAGGAGCACGATAGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATTTTGATATCTGTTGTTAGTTCCATAGGATTTGTCATAAAGACTAAGTACCAATCCATAGCGTGGTGGTACTTGCGGCCTGACAAAATTGATACGCAGTATAATCCCCAGAAAATTGGAGTGGCTGGGATTAGTCATCTGGTTACTGCACTCATCCTTTATGGATATTTGATACCCATCTCACTTTACGTTTCGATTGAGGTTGTGAAGGTTTTACAGGCAACCTTCATCAACCAAGACATTCAAATGTATGACGAAGAAACCGGGACTCCAGCCGATGCACGGACGTCAAATTTGAATGAAGAGTTGGGGCAGGTGGACACCATCCTCTCTGATAAAACTGGAACCTTAACCTGCAATCAGATGGACTTCTTGAAGTGTTCCATTGCCGGTACTGCATATGGTGTGCGTTCAAGTGATGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGACGAAGATTCCGATCTCTCCAATTTCCCCATGCCTAAGACTAAAGTTTCATGGGAAGATGTTAGAAGAGCTGAAGAAATTGAACTGGAGTCTGTTGTTACTACCAATAGTGATGAGGATCATAGACAGACCGTAAAGGGATTTGGTTTCGAAGACAACCGTCTTATGAATGTTAACTGGTTGAAAGAGCCCAATGCTGATGTTATTTTGATGTTTTTTCGTATATTAGCAGTTTGCCATACCGCCATTCCTGAGTTGAATGAGGAGACTGGCAGTTTTACATATGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCGGCAAGAGAGTTTGGTTTTGAGTTATTTAAAAGGACTCAGTCAAGTGTTTTCATACGTGAAAGACTATCTGCTTCAGGAGAAGTGGTTGAAAGAGAATACAAACTCTTGAATCTGCTAGATTTCACTAGTAAAAGAAAGCGTATGTCAGTGATAGTACGTGATGAGGAGGGAAGCATTTTTCTTCTGTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCAAAGAATGGAAAAATGTATCTGGAGGCTACTACTAAACATTTAAATGAATATGGAGAAGCTGGTTTGCGAACCCTAGCCCTGGCTTATAGAAAGCTTGATGAGCAAGAATTCTCTGCTTGGAACAACGAGTTTCAGAAAGCCAAAGCAGCTGTTGGAGTGGACAGAGAGTTAACACTTGAGCGGGTATCAGAGCTTATGGAAAAAGAGTTGATTCTTGTTGGGGCTACCGCTGTGGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACCGGGGATAAGATGGAAACTGCAATAAACATTGGATTTGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAGCTACTCCGAATTCAGAAAATGATGGCAAAGAGATCATCAAGGACAACATTATGAATCAAATCACCAATGCCTCACAAATGATAAAGCTGAACAAAGACCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAAGATGATGTGAAGCACCAGTTTTTGGGATTGGCTGTTGATTGTGCATCTGTCATCTGCTGCCGTGTGTCTCCCAAGCAAAAGGCATTGGTGACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGGATGATTCAAGAAGCAGATATTGGTGTAGGAATCAGTGGGGTTGAAGTTGTGGAACTCAAGCTTGCAACTTCCTTTCAGGCAGTGATGGCTAGTGACTTTGCTATTGCCCAATTTCGATTTCTAGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTATAAGAGAATAGCCCAAATGATATGTTATTTCTTCTACAAGAATATAGCATTTGGCCTAACCATCTTCTACTTTGAGGCTTTTACATCATTCTCTGGTCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCACTTGGTGTTTTTGAACAAGACGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAACAAGGCCCCAAAAATCTGTTCTTTGACTGGTGCAGAATACTGGGATGGATGGGAAATGGTCTCTTTTCCTCCCTAGTAATTTTCTTCCTTAACATCGCCATCTTCAACGACAAAGCATTCCGTTCTAATGGCCAGACTTCTGATATGGCCGCTGTTGGTACCACGATGTTCACTTGCATCATCTGGGCCGTCAACTTCCAGATCGCGCTAATAATGAGCCATTTTACATGGATTCAACACCTCTTTGTATGGGGCAGCATAACCACATGGTACCTCTTTCTCTTGTTATATGGCATGCTTTCTCCAGAATATTCTAAAACTGCTTACCAAATACTAGTTGAATCTCTGGGTCCTGCACCGATATATTGGATAGCAACACTTTTAGTTACAGTTACATGCAATCTTCCTTATCTTGGACACATATCCTACCAAAGATGTTTCAATCCTATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAAGATCATCACATGTGGACAAGGGAGAGGTCAAAAGCAAGACAAGAAACCCAGATTGGATTCACAGCAAGAGTTGAAGCAAAGATTAGACAATTGAAAGGAAAACTGCAAAAGAAGCAATCTTCATTGGGTATTTTGTCATTGTGA 3681 0.4173 MARGRIRARLRRSNLYTFGCLRPSTSEEEPHPLQGPGFSRTVHCNQPLVHERKPLFYCKNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSTSSMSPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNHHKGNGVFGPRSWQNIMVGDVVKVEKDHFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLTLDNDGAFKDFTGTIRCEDPNSNLYTFVGNLEYERQVYPLDPSQILLRDSKLRNTDYIYGVVIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLILISVVSSIGFVIKTKYQSIAWWYLRPDKIDTQYNPQKIGVAGISHLVTALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSDVELAAAKQMASDLEDEDSDLSNFPMPKTKVSWEDVRRAEEIELESVVTTNSDEDHRQTVKGFGFEDNRLMNVNWLKEPNADVILMFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLVAAREFGFELFKRTQSSVFIRERLSASGEVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSIFLLCKGADSIIFDRLSKNGKMYLEATTKHLNEYGEAGLRTLALAYRKLDEQEFSAWNNEFQKAKAAVGVDRELTLERVSELMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICIATPNSENDGKEIIKDNIMNQITNASQMIKLNKDPHAAFALIIDGKTLTYALEDDVKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEVVELKLATSFQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWCRILGWMGNGLFSSLVIFFLNIAIFNDKAFRSNGQTSDMAAVGTTMFTCIIWAVNFQIALIMSHFTWIQHLFVWGSITTWYLFLLLYGMLSPEYSKTAYQILVESLGPAPIYWIATLLVTVTCNLPYLGHISYQRCFNPMDHHIIQEIKYYKKDIEDHHMWTRERSKARQETQIGFTARVEAKIRQLKGKLQKKQSSLGILSL 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1370 1226 CDD P-type_ATPase_APLT_Dnf-like 60 1043 - -
Lal1g1370 1226 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1170 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal1g1370 1226 Pfam Cation transport ATPase (P-type) 544 649 - -
Lal1g1370 1226 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Lal1g1370 1226 Gene3D - 584 701 IPR023299 GO:0000166
Lal1g1370 1226 Gene3D - 434 469 IPR023299 GO:0000166
Lal1g1370 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1150 IPR023298 -
Lal1g1370 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 965 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal1g1370 1226 SUPERFAMILY HAD-like 410 927 IPR036412 -
Lal1g1370 1226 Gene3D - 718 924 IPR023214 -
Lal1g1370 1226 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lal1g1370 1226 Gene3D - 419 433 IPR023214 -
Lal1g1370 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 683 IPR023299 GO:0000166
Lal1g1370 1226 SFLD C1.7: P-type atpase like 405 935 - -
Lal1g1370 1226 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1224 - -
Lal1g1370 1226 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lal1g1370 1226 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Lal1g1370 1226 Coils Coil 448 468 - -
Lal1g1370 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lal1g1370 1226 SFLD p-type atpase 405 935 IPR044492 -
Lal1g1370 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 912 1162 IPR032630 -
Lal1g1370 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1224 - -
Lal1g1370 1226 Gene3D - 113 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1370 Lal-Chr1 15578351 15585726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1370 1 1225 Primary Pumps ATPases AT1G17500 74.593 0.0 1918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1370 K01530 - gmx:100819559 2135.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1370 1 15578351 15585726 Lal1g1370 1 15578351 15585726 ECH
Lal25g0338 25 2310847 2317773 Lal1g1370 1 15578351 15585726 PCT
Lal10g1088 10 17779438 17785666 Lal1g1370 1 15578351 15585726 PCT
Lal8g0291 8 1963333 1970186 Lal1g1370 1 15578351 15585726 PCT
Lal1g1370 1 15578351 15585726 Lal25g0338 25 2310847 2317773 PCT
Lal1g1370 1 15578351 15585726 Lal10g1088 10 17779438 17785666 PCT
Lal1g1370 1 15578351 15585726 Lal8g0291 8 1963333 1970186 PCT