Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1362 ATGGAATTGCAGCTTATTTTTCTGTTAATTTTGCTACATTTAGTTGACAGTACTCAACAGCTTCATGAAAATGCAGTAGCCCCTAATCTGCATCATTCCAAAGGCAGAAGCCAATTTAGTATTGCACTCTCACCATCAAAGCAATCTTATGGAGTTCCTACAAGTATTGCTCTTCCACCTTCCAAGTCAATTCCAAAAACTTCTACAAAAGAAAGGATACATAGTTCTGTGGACACTCCAATATCACATCATAAGCATCACTATACTAATACAAAGTCCACAAACCCAACTCTAGCACCAATCTACCCAATGCAGCCTCCTACTTATAGCCATCAAGTGCCTTCTCCTTCACCAAGAACTTCACATCTAGGTTCATCACTAAAGAAGATAAAGGCTCCACCACCAGCACATGCTTTGGTTATTCCACCTCCACCTCCTAATAAGGATTGCTTGTCAATGACTTGCTCAGAGCCGTTGACGTATACGCCTCCCGGATCCCCGTGTGGTTGTGTGTGGCCGCTTCAAGTTAAACTCGGCATAAACATTGCAATATACAAGTTTTTTCCTTTGGTTTCAAAGCTTGCTGAGGAAATTGCAGCCAGTGTTTTGTTAAACCATAGCCAAGTGAGAATCGTCGGAGCCGATGCAGCAAAACAGCAAGTAGAGAAAACCAATGTGCTCATAGACATGGTGCCTAAAGGAGTAAAATTTGATGATACCACAGCATTTTTAATATATAAGAAGTTCTGGCACAAGGAGATTCTCATAGACTATTCCCTCTTTGGTGCTTATGAAGTACTATATGTTCAATATCCAGGTCTTCCACCAACTCCATCAAGTGTTTCTAGTATGGACGATGGTCCAAATCCGGGCCGAAACAACAATGGGGCAATGATGAAACCGTTGGGAGTAGATGTCTCAAGGAAGAAAAAAGAAGGGAGTGATGGAAGAATTGTTGTTGTAATTGTGCTGTCATCTATTACTGCTTTTGTTCTATTCATTGGACTTGTCTGGCTTTGTCTATTGAAATGCAGTTCCTATGTTCTTAAATCCAAACAACCTCCAGAAGTTTTAATCTCATCTGCTTCCAAAGTATCAGGGTCTGCAATATCTCTGACTCGTGGCGTCATGCCGAGGTCTGGATCACTGTCCTTCAATTCTGGAACAATGACATACACAGGGTCTGCAAAAACATTTACTCTGAATGATATAGAGAAAGCAACAAATAACTTTGACTCTTCAAGAATATTAGGAGAAGGTGGATTTGGACTTGTTTACAAAGGTATTCTAAATGATGGGAGGAATGTAGCAGTGAAGATTCTCAAAAGAGATGATCAGCGTGGCGGCCGCGAATTCTTAGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAGTTGTTTGGTATATGCACAGAGAAAAAGACTCACTGCCTAGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAGTCACACTTACATGGCGCTGATAAGGAAACTGATCCACTTGATTGGGATGCTAGGATGAAGATTGCAATTGGTGGAGCTAGGGGATTGGCTTATTTACATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAACATCTTGTTAGAACATGATTTTACACCAAAAGTATCAGATTTTGGATTGGCTAGAACAGCATTGGATGAGGGAAACAAGCACATTTCTACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATGTTCTTGTCAAAAGTGATGTTTACAGCTACGGAGTTGTACTCCTAGAGCTCCTAACTGGAAGAAAGCCAGTGGATTTGTCACAACCACCCGGTCAAGAAAATCTCGTTACTTGGGCTCGTCCACTTCTCGCAAGCAAAGAGGGTTTAAATATGATCATAGACCCATTTGTTAAGGACAACATATCTGATGATACTTTGGTTAAAGTTGCAGCAATTGCTTCCATGTGTGTGCAACCCGAAGTCTCTCAACGACCGTTCATGGGCGAAGTCGTTCAAGCCTTGAAGCTTGTATGCAGCGAGTTTGATGAACCAAGATCAGTTAGTTTTCAAGAAGAGGCTCTTATAAGTAGTTATGCAGAAGGGATACTTAGAGAGGACTTATTAGAGTACCATAAACCATTATCTGGATATCAATCTGGCGAAGAAAATGTATCGTTATCGGTGTCCGATTTTCTTAGTACTTCAGGCCAGGAATTTGAGTCCTTTAGGAGGCATTCTGCTTCAGGATCTATGATCATTGGGAAGAAAAGACAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTACCACTAGTGACTATGGATTTTCAACTAAACTTTGA 2373 0.4105 MELQLIFLLILLHLVDSTQQLHENAVAPNLHHSKGRSQFSIALSPSKQSYGVPTSIALPPSKSIPKTSTKERIHSSVDTPISHHKHHYTNTKSTNPTLAPIYPMQPPTYSHQVPSPSPRTSHLGSSLKKIKAPPPAHALVIPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLGINIAIYKFFPLVSKLAEEIAASVLLNHSQVRIVGADAAKQQVEKTNVLIDMVPKGVKFDDTTAFLIYKKFWHKEILIDYSLFGAYEVLYVQYPGLPPTPSSVSSMDDGPNPGRNNNGAMMKPLGVDVSRKKKEGSDGRIVVVIVLSSITAFVLFIGLVWLCLLKCSSYVLKSKQPPEVLISSASKVSGSAISLTRGVMPRSGSLSFNSGTMTYTGSAKTFTLNDIEKATNNFDSSRILGEGGFGLVYKGILNDGRNVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLFGICTEKKTHCLVYELVPNGSVESHLHGADKETDPLDWDARMKIAIGGARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHVLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWARPLLASKEGLNMIIDPFVKDNISDDTLVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFDEPRSVSFQEEALISSYAEGILREDLLEYHKPLSGYQSGEENVSLSVSDFLSTSGQEFESFRRHSASGSMIIGKKRQFWQKLRSLSRGTTSDYGFSTKL 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1362 790 CDD STKc_IRAK 417 685 - -
Lal1g1362 790 MobiDBLite consensus disorder prediction 77 129 - -
Lal1g1362 790 MobiDBLite consensus disorder prediction 279 300 - -
Lal1g1362 790 ProSiteProfiles Protein kinase domain profile. 411 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1362 790 Gene3D Transferase(Phosphotransferase) domain 1 487 705 - -
Lal1g1362 790 MobiDBLite consensus disorder prediction 50 66 - -
Lal1g1362 790 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Lal1g1362 790 Gene3D Phosphorylase Kinase; domain 1 384 486 - -
Lal1g1362 790 PANTHER OS01G0750732 PROTEIN 19 789 - -
Lal1g1362 790 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Lal1g1362 790 SUPERFAMILY Protein kinase-like (PK-like) 390 684 IPR011009 -
Lal1g1362 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Lal1g1362 790 MobiDBLite consensus disorder prediction 50 69 - -
Lal1g1362 790 PANTHER OS01G0750732 PROTEIN 19 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1362 Lal-Chr1 15457209 15464232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1362 147 790 Receptor kinase-like Gene Family AT5G56890 59.036 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal1g1362 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1362 - - gmx:100814040 1171.38