Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1356 ATGAGTCGAGAGCAACATAAGCGAGGGAAGCAAGAGAAAGACTCTGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCGAGGGAAATTCCGAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTTGTGGTTGTGCCTTCACAAAGTTCGGGCAGAAGATTATGGGGATTTCCAAGGTTTTCTGGTGACTGTGCCAGTGGCAATAAGAAGTGCCCGACCGGAACAATTTTAGAGCAGAAGAGTGATATAACGGATTGTTGCTCACAGATGATCCTTCAGCTCCATGATGTATATGATCCAAATAAGGTTAATGTCAGGATTAAAATTGTTTCCGGGTCACCTTGTGGAGCAGTGGCAGCAGAAGCCAAGAAAGCCGAAGCTAGTTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAAAAGCGATGCATAGAAGAACTGCAGTGTAATATTGTGGTTATGAAACATTCCCAACCAAAAGTACTCCGCTTGAATTTGATTGGACCGCAGAAGAAGGATCTCGAAGAAACACGTCCTTCACCTTCTGTTCGAGATGAGATGCGTGAAAAGAAAACCAAGAACAAGAGTGATTCTTCAAATTCTATTAAAGGACCGGTCAGCACTCCAAGTAGCAGCCCAGAGCTAGGGACACCTTTCACTGCAACGGAAGCTTGTACTTCATCAGTTTCAAGCTCTGACCCAGGAACTTCACCGTTCTTTATCTCAGATATGCATGGCGAGTTAAAGAAAGAGCAAACTATCAATGAGAATCAAGAACTCAATGATACCAATTCAGACACGGAAAGTGAAAATCTGTCTACATCTTCGGCAAGCATGAGATTCCAGCCATGGATCACAGATTTACTTTTACATCAACACAACGGAGAAAGATCGGATGTATCATCTCATGATAGGTCTCGTCATTCATCTACAACCAGAGCTTTGCTAGAAAAGTTTTCAAGGCTTGATAGAGGATCTGGAATTGAAATGTCAACGTATAGAACCGATTCGGATTTCAGTGGAAATCTAAGAGAAGCAATAGCATTATCTAGAAATGCACCACTTGGTCCACCTCCACTATGCTCAATATGTCAACACAAGGCACCCGTGTTCGGGAAACCTCCAAGGTGGTTCAGCTATGCCGAGTTAGAACTTGCTACTGGTGGATTTTCGCAAGCTAACTTCTTGGCAGAAGGAGGATTTGGATCTGTCCACAGAGGGGTTCTACCAGAGGGACAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGTTCGCAGGGTGATGTTGAATTTTGCTCGGAGGTAGAAGTCCTAAGCTGCGCTCAACACCGAAATGTTGTTATGCTGATCGGGTTCTGTATAGAAGATAAAAGAAGACTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAACGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGGTTACGGTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTCATAACCCATGATTTTGAACCGCTGGTTGGTGATTTTGGCCTGGCAAGGTGGCAACCCGACGGAGACACAGGTGTCGAGACCAGAGTAATTGGAACATTTGGGTATTTGGCTCCGGAATATGCTCAAAGTGGCCAAATCACCGAAAAAGCAGATGTTTATTCTTTTGGGGTTGTATTAGTCGAGCTTGTTACCGGGAGAAAAGCTGTGGATCTCAGTCGGCCGAAGGGACAGCAATGTCTTACTGCATGGGCGCGGCCATTATTAGAAGAATACGCCATTGAAGAGCTTATTGATCCAAGACTGAGAAACCACTATTCAGAAAATGAGGTCTATTGCATGCTGCATGCAGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCGCGCATGTCACAGGTTCTCCGAATACTGGAGGGTGACATCGTCATGGATACAGGTTACATTTCAACTCCGGGTTATGATGTAGGTAACCGGAGTGGTCGAATCGGGTTAGAGCCACTGCAGAGGCAGCACCAGCTTAGTGGTCCCATGTTAGAAGAGTCAATAGAATCATTCAGTGGGAAACTATCCCTTGACAAATACAAACCTACCTATTGGGACAGGGACAAAGCTAGAAGGACATCATGTGAAGATAACATTTAA 2244 0.4461 MSREQHKRGKQEKDSDGAEKVIVAVKASREIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFSGDCASGNKKCPTGTILEQKSDITDCCSQMILQLHDVYDPNKVNVRIKIVSGSPCGAVAAEAKKAEASWVVLDKQLKHEEKRCIEELQCNIVVMKHSQPKVLRLNLIGPQKKDLEETRPSPSVRDEMREKKTKNKSDSSNSIKGPVSTPSSSPELGTPFTATEACTSSVSSSDPGTSPFFISDMHGELKKEQTINENQELNDTNSDTESENLSTSSASMRFQPWITDLLLHQHNGERSDVSSHDRSRHSSTTRALLEKFSRLDRGSGIEMSTYRTDSDFSGNLREAIALSRNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTAWARPLLEEYAIEELIDPRLRNHYSENEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDIVMDTGYISTPGYDVGNRSGRIGLEPLQRQHQLSGPMLEESIESFSGKLSLDKYKPTYWDRDKARRTSCEDNI 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1356 747 SUPERFAMILY Protein kinase-like (PK-like) 385 675 IPR011009 -
Lal1g1356 747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Lal1g1356 747 CDD STKc_IRAK 407 673 - -
Lal1g1356 747 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Lal1g1356 747 PANTHER OS01G0253100 PROTEIN 16 706 IPR045271 GO:0004714|GO:0006468
Lal1g1356 747 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g1356 747 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 706 - -
Lal1g1356 747 MobiDBLite consensus disorder prediction 209 231 - -
Lal1g1356 747 Gene3D Transferase(Phosphotransferase) domain 1 477 679 - -
Lal1g1356 747 MobiDBLite consensus disorder prediction 183 208 - -
Lal1g1356 747 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Lal1g1356 747 MobiDBLite consensus disorder prediction 183 231 - -
Lal1g1356 747 Coils Coil 261 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1356 Lal-Chr1 15390935 15396773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1356 381 690 Trihelix Transcription Factor Family AT1G70460 51.250 2.61e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lal1g1356 PK_Tyr_Ser-Thr 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1356 - - gmx:100783226 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1356 1 15390935 15396773 Lal1g1356 1 15390935 15396773 ECH
Lal20g1101 20 15172362 15178220 Lal1g1356 1 15390935 15396773 LSH
Lal25g0320 25 2192661 2197967 Lal1g1356 1 15390935 15396773 PCT
Lal8g0277 8 1861255 1867022 Lal1g1356 1 15390935 15396773 PCT
Lal1g1356 1 15390935 15396773 Lal25g0320 25 2192661 2197967 PCT
Lal1g1356 1 15390935 15396773 Lal8g0277 8 1861255 1867022 PCT