Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1341 ATGGCGACACCGCCACCAATGGGACCACCGGGAAACCCAATGTTTGAAGGAGGACCGCCGCCGCCACCGCAACCTCCGGGGACAGACATGACCGGAATATGCTTCAGAGACCAGCTCTGGCTTAACACTTACCCTTTGGATCGGAACTTGGTCTTTGATTATTTCGCTATGTCACCTTTCTACGATTGGACTTGTAACAATGAACAGCTCCGAATTCGTTCTGTTCACCCTCTCGATATCTCTAATCTCACGGTTTTTGTGAATTGGGTGGTTCAGAAAGTTAGGAAAATGACAGGGATAGAGTATATACTTAGTGAAGTATTGGAGCCCCACCTTTTTGTTATCCGTAAGCAAAAGAGAGACAGCCCTGAGAAAGTTACACCGATGCTGGCATATTACATCTTGGATGGTTCAATATACCAGGCACCACAACTATGCAATGTTTTTGCTGCTCGAATAGGAAGGACACTCCATCATATACAAAAGGCTTTTACTATAGCTGCCTCGAAATTGGAGAAGATAGGATATGTATCTGACCATAAAAGTGGTGTATTACTTACTTTTGTGAACGCTAACGTAATTGTAATTCCTCTTGCCGGGTCAGTTGATTCTGAAAATGAGAGTGAAGTGCTGGAATCAAAGGTCAGTAAGGAGACAATTGACCTGAAGGAAGTTAAGCGAATCGATATGATCCTTGCATCCCTTCAACGCAAGCTACCACCAGCTCCACCTCCACCACCATTTCCAGAAGGGTATATTCCACCTCCAACATCAGAAAGTGAAGAAGGTACTGACACTAAGGAAGCTACAGGGACACAAGCTCCTCTTTCTGATCCCATAATTGATCAAGGACCTGCAAAAAGAATGAAGTTTTGA 876 0.4441 MATPPPMGPPGNPMFEGGPPPPPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFAMSPFYDWTCNNEQLRIRSVHPLDISNLTVFVNWVVQKVRKMTGIEYILSEVLEPHLFVIRKQKRDSPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRTLHHIQKAFTIAASKLEKIGYVSDHKSGVLLTFVNANVIVIPLAGSVDSENESEVLESKVSKETIDLKEVKRIDMILASLQRKLPPAPPPPPFPEGYIPPPTSESEEGTDTKEATGTQAPLSDPIIDQGPAKRMKF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1341 291 MobiDBLite consensus disorder prediction 236 291 - -
Lal1g1341 291 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 199 291 - -
Lal1g1341 291 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 21 180 - -
Lal1g1341 291 Pfam MED6 mediator sub complex component 33 168 IPR007018 GO:0003712|GO:0006357|GO:0016592
Lal1g1341 291 MobiDBLite consensus disorder prediction 238 254 - -
Lal1g1341 291 PANTHER MED-6-RELATED 21 180 IPR007018 GO:0003712|GO:0006357|GO:0016592
Lal1g1341 291 PANTHER MED-6-RELATED 199 291 IPR007018 GO:0003712|GO:0006357|GO:0016592
Lal1g1341 291 Gene3D Mediator complex, subunit Med6 27 167 IPR038566 -
Lal1g1341 291 MobiDBLite consensus disorder prediction 1 28 - -
Lal1g1341 291 MobiDBLite consensus disorder prediction 1 29 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Lal1g1341 Med6 2.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1341 K15128 - gmx:100792248 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1341 1 15179377 15183256 Lal1g1341 1 15179377 15183256 ECH