Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1340 ATGAAAATCAATAGCAAAGAATCACTTGTTATTGTTCTGTTCTATGTATTTGTATTCTTAAGAAGTAACAATGCACAAGATACTCTTGTTCCAGCTATAATGACATTTGGTGACTCTATTGTTGATGTAGGGAATAATGACTATGTTACCACTCTTTTCAAGGCTAACTACCCTCCCTATGGGAGGGACTTTAAAAATCATCAACCTACTGGAAGGTTTTGTAATGGCAAATTAGCTACTGATATTACTGCTGAAACATTGGGTTTTAAGAGTTTTGCCCCTGCATACCTTAGCCCACACGCATCAGGGAAAAACCTCCTTATTGGAGCCAACTTTGCTTCTGCTGCTTCTGGTTATGATGAAAAGACTTCTATTTTGAATCAAGCAATTCCATTGTCCCAACAATTAGATTATTTCAAGGAATACAAAATCAAACTGGCTCAGGTTGCTGGCTGTAAAAAATCAGCTTCACTTATCAAAGATGCATTGTACTTATTGAGTGCTGGAAGCAGTGATTTTACGCAAAATTACTATGTCAATCCTTGGATCAACAAAGCTATCACTCCTGATGAGTATTCTTCATACCTAGTTGGACCATTTACAAGATTTATTAAGGACTTGTATGGACTTGGAGCTAGGAAAATTGGAGTGACATCACTTCCACCATTGGGATGCCAACCTGGTGCAAGAACATTAATTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACAATGATGCCCAAAGATTTAACAAGAAAGTTAACTCAGCAGCAACAAATCTTCAAAAACAACTTCCTGGTCTTAAGATTGTTGTCTTGGATATTTTCAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATATGGTTTTGTGGAGGCTAGGAGAGGTTGTTGTGGGACAGGGTTAGTAGAGACAACAACCTTGTTGTGCAATACAAAATCAATAGGAACATGTTCTAATGCAAATCGATATGTGTATTGGGACAGTGTTCATCCTTCAGAATCTGCTAACCAAGTTCTAGCTGATGCATTGATTCTACCAGCCATAACTCTTATAGGATAA 1068 0.3773 MKINSKESLVIVLFYVFVFLRSNNAQDTLVPAIMTFGDSIVDVGNNDYVTTLFKANYPPYGRDFKNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPHASGKNLLIGANFASAASGYDEKTSILNQAIPLSQQLDYFKEYKIKLAQVAGCKKSASLIKDALYLLSAGSSDFTQNYYVNPWINKAITPDEYSSYLVGPFTRFIKDLYGLGARKIGVTSLPPLGCQPGARTLIGFHENGCVSRINNDAQRFNKKVNSAATNLQKQLPGLKIVVLDIFKPLYDLVQSPSKYGFVEARRGCCGTGLVETTTLLCNTKSIGTCSNANRYVYWDSVHPSESANQVLADALILPAITLIG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1340 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Lal1g1340 355 Gene3D SGNH hydrolase 19 350 IPR036514 -
Lal1g1340 355 PANTHER GDSL ESTERASE/LIPASE EXL3 2 353 - -
Lal1g1340 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 353 - -
Lal1g1340 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Lal1g1340 355 SUPERFAMILY SGNH hydrolase 33 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1340 Lal-Chr1 15171123 15173776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1340 5 347 Pollen Coat Proteome AT1G75910 35.549 2.42e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1340 - - gmx:100795716 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1340 1 15171123 15173776 Lal1g1340 1 15171123 15173776 ECH
Lal20g1123 20 15527627 15530744 Lal1g1340 1 15171123 15173776 LSH
Lal10g1112 10 17939562 17948119 Lal1g1340 1 15171123 15173776 PCT
Lal1g1340 1 15171123 15173776 Lal10g1112 10 17939562 17948119 PCT